Influence of language and ancestry on genetic structure of contiguous populations: A microsatellite based study on populations of Orissa

BACKGROUND: We have examined genetic diversity at fifteen autosomal microsatellite loci in seven predominant populations of Orissa to decipher whether populations inhabiting the same geographic region can be differentiated on the basis of language or ancestry. The studied populations have diverse historical accounts of their origin, belong to two major ethnic groups and different linguistic families. Caucasoid caste populations are speakers of Indo-European language and comprise Brahmins, Khandayat, Karan and Gope, while the three Australoid tribal populations include two Austric speakers: Juang and Saora and a Dravidian speaking population, Paroja. These divergent groups provide a varied substratum for understanding variation of genetic patterns in a geographical area resulting from differential admixture between migrants groups and aboriginals, and the influence of this admixture on population stratification. RESULTS: The allele distribution pattern showed uniformity in the studied groups with approximately 81% genetic variability within populations. The coefficient of gene differentiation was found to be significantly higher in tribes (0.014) than caste groups (0.004). Genetic variance between the groups was 0.34% in both ethnic and linguistic clusters and statistically significant only in the ethnic apportionment. Although the populations were genetically close (F(ST )= 0.010), the contemporary caste and tribal groups formed distinct clusters in both Principal-Component plot and Neighbor-Joining tree. In the phylogenetic tree, the Orissa Brahmins showed close affinity to populations of North India, while Khandayat and Gope clustered with the tribal groups, suggesting a possibility of their origin from indigenous people. CONCLUSIONS: The extent of genetic differentiation in the contemporary caste and tribal groups of Orissa is highly significant and constitutes two distinct genetic clusters. Based on our observations, we suggest that since genetic distances and coefficient of gene differentiation were fairly small, the studied populations are indeed genetically similar and that the genetic structure of populations in a geographical region is primarily influenced by their ancestry and not by socio-cultural hierarchy or language. The scenario of genetic structure, however, might be different for other regions of the subcontinent where populations have more similar ethnic and linguistic backgrounds and there might be variations in the patterns of genomic and socio-cultural affinities in different geographical regions

Pharmacological activity and biochemical interaction of zingerone: a flavour additive in spice food

Zingerone (4-(4-Hydroxy-3-methoxyphenyl)-2-butanone) is one of the non-volatile and nontoxic compounds of ginger. It is also called vanillylacetone with a crystalline solid form which is sparingly soluble in water and more soluble in ether. The contribution of this compound in ginger is about 9.25%. The chemical structure is made of a phenolic ring with methoxy group attached to benzene ring. Gingerol can be heated to form zingerone by retroaldol reaction. It has been reported that zingerone has multiple pharmacological activities. It is effective against diarrhoea causing enterotoxigenic bacteria that leads to infant death. It is also used against intestinal gastric, oxidative stress, weak immunity, obesity. During its activity against cancer, it governs the expression of different cell cycle protein and TGF-?1 expression. Antioxidant response is controlled by inducing the activity of ROS neutralising enzymes like superoxide dismutase, catalase and glutathione reductase. It can also reduce various inflammations by restricting the activity of interleukins. This review summarizes the multiple pharmacology activities of zingerone against various important diseases like cancers, tumors, inflammations, oxidative conditions, microbial infections, biofilm formations, thrombosis and other diseases. In addition, the molecular regulation of these pharmacological responses by zingerone is also critically discussed

CHEMICAL COMPOSITION, ANTIOXIDANT AND ANTIMICROBIAL ACTIVITY OF ESSENTIAL OIL AND EXTRACT OF ALPINIA MALACCENSIS ROSCOE (ZINGIBERACEAE)

Objective: The present study was conducted to examine the chemical composition, in vitro antioxidant and antimicrobial activity of both the essential oil and methanolic extract of Alpinia malaccensis leaves. Methods: The essential oils obtained from the leaves of Alpinia malaccensis were analyzed by gas chromatography/mass spectrometry to determine chemical compositions. Antioxidant activity of both oil and extract were determined using DPPH and ABTS assay whereas the antimicrobial effects were tested by inhibition zone diameter and minimum inhibitory concentration.  Results: The GC–MS analysis of the essential oil identified 10 components comprising 92.7% of the oil. The major constituents of the oil are α-phellandrene (43.9%), β-cymene (31.7%), β-pinene (4.6%). Total phenolic content of the leaf extract of A. malaccensis was found to be 76.25 mg GAE/g of the extract. Essential oil and methanolic extract displayed significant antioxidant activities with IC50 values of 18.26μg/ml and 22.5μg/ml in DPPH and 20μg/ml and 26.23μg/ml in ABTS respectively. Oil and extract showed very good activity against all four microbial strains. Conclusion: The result showed that the essential oil has better activity than extract. Thus it could be served as potential source of natural antioxidant, natural antimicrobial as well as natural preservative ingredient in cosmetics, food and pharmaceutical industry

Deletions in the Y-derived amelogenin gene fragment in the Indian population

BACKGROUND: Rare failures in amelogenin-based gender typing of individuals have been observed globally. In this study, we report the deletion of a large fragment of the amelogenin gene in 10 individuals out of 4,257 male samples analyzed from 104 different endogamous populations of India. METHODS: Samples were analyzed using commercial genetic profiling kits. Those that exhibited failures in amelogenin-based gender identification were further analyzed with published as well as newly designed primers to ascertain the nature and extent of mutation. RESULTS: The failure rate among Indian males was 0.23 %. Though the exact size and nature of the deletion (single point mutations at a number of positions or a single large deletion) could not be determined in the present study, it is inferred that the deletion spans a region downstream of the reverse primer-binding site of commercially available amelogenin primer sets. Deletions were conspicuously absent among the Mongoloid tribes of Northeast India, while both caste and tribal groups harbored these mutations, which was predominantly among the Y-chromosomes belonging to J2 lineage. CONCLUSION: Our study indicates that the different amelogenin primer sets currently included in genetic profiling multiplex kits may result in erroneous interpretations due to mutations undetectable during routine testing. Further there are indications that these mutations could possibly be lineage-specific, inherited deletions

GC-MS ANALYSIS AND EVALUATION OF BIOACTIVITIES OF KAEMPFERIA PARISHII - A NATURAL SOURCE OF TOTAROL

Objective: The present study was aimed for phytoconstituent analysis, in vitro antioxidant and antimicrobial activities of leaf and rhizome extracts of an unexplored plant, Kaempferia parishii (Zingiberaceae).Methods: The extracts were analyzed by gas chromatography/mass spectrometry to determine volatile chemical constituents. Antioxidant activity of extracts was determined using DPPH assay whereas the antimicrobial effects were tested by inhibition zone diameter and minimum inhibitory concentration.Results: GC/MS analysis revealed the presence of 7 and 8 identified components accounting for 92.1% and 82.86% of the leaf and rhizome extract of Kaempferia parishii respectively. In leaf extract phytol (72.55±0.5%), hexadecanoic acid methyl ester (4.94±0.2%), hexahydro farnesyl acetone (3.78±0.2%), dibutyl phthalate (3.31±0.2%) were found to be the major constituents and those of rhizome extract were totarol (74.96±0.86%), cembrene (2.83±0.2%), borneol (1.23±0.15). Both the extracts exhibited low to moderate antioxidant activity. They possess very weak activities against some tested microorganisms while the extracts had no activity against some microorganisms.Conclusion: Totarol, an antimicrobial agent, was found to be the major constituent of Kaempferia parishii rhizome extract. Thus, Kaempferia parishii can be used as a natural source of totarol. This is the first report on the unexplored plant, Kaempferia parishii.Keywords: Kaempferia parishii, GC-MS analysis, Totarol, Phytol, Antioxidant activity, Antimicrobial activit

EVALUATION OF DRUG YIELDING POTENTIAL OF MICROPROPAGATED CURCUMA AROMATICA

Objective: GC MS analysis and antioxidant activity of micropropagated and conventionally grown Curcuma aromatica essential oil and extract was done for their large scale commercial cultivation. Molecular marker based studies were performed to know their genetic fidelity as well as to trace any somaclonal variation existing between the regenerants.Methods: In vitro regeneration and multiplication were done using Murashige and Skoog media with various combinations of growth regulators. Component identification was done by GC MS analysis. Random amplified polymorphic DNA (RAPD) and inter simple sequence repeat (ISSR) markers were used for molecular profiling. Antioxidant activity was performed using 2, 2-diphenyl-1-picrylhydrazyl (DPPH).Results: Molecular marker-based analysis revealed uniform banding patterns similar to those of the mother plants. Gas chromatography and mass spectroscopy (GC MS) analysis showed the presence of 10 major components accounted for 95.5% of the total compounds. The major components in micropropagated and field grown mother plants were found to be alpha phellandrene (41% and 38%), 4-carene (23% and 25%) and terpeneol etc. Antioxidant activity of leaf oil (IC50-29.3 µg/ml) and methanolic extract (IC50-101.25 µg/ml) of in vitro grown plants showed increased free-radical scavenging activity. Conclusion: Absence of any type of remarkable polymorphism in the essential oil quality and antioxidant activity the present protocol could be used commercially for large scale propagation of C. aromatica. The present report bears immense potential for the future improvement, conservation and domestication of C. aromatica to explore its high prized secondary metabolites.Â

Quality control of marketed herbal products of Asparagus racemosus Willd. through high performance thin layer chromatography (HPTLC) analysis

Asparagus racemosus Willd. is a valuable medicinal plant which is used all over the world. There are several marketed products of A. racemosus. The high demand for this herb has increased the risk of adulteration in its commercial products. The adulterated herbal products might pose serious ill effects on health. Therefore, it is necessary to check the quality of marketed products in terms of the presence of their major bioactive compounds. The present study aimed to carry out the qualitative and quantitative analysis of Shatavarin IV in marketed products of A. racemosus through a validated high performance thin layer chromatography (HPTLC) method. Ten marketed products were analysed and all of them had shown the presence of Shatavarin IV which was quantified. The identification and quantification were done by taking a standard Shatavarin IV as reference. The Shatavarin IV was detected at Rf 0.4±0.05 and showed maximum absorption at 425 nm. The Shatavarin IV was quantified using a 6-point calibration curve having a standard deviation of 3.89 % with an R2 value of 0.9968. The amount of Shatavarin IV varied between 1.47±0.25 to 2.69±0.51 mg/g on a dry weight basis which is a normal range in the raw plant materials. Thus, the present findings would be a simple, reliable and cost-effective method for the quality determination of herbal products of A. racemosus. The developed HPTLC chromatograms would serve as a reference for the quality assessment of commercial products of A. racemosus in future

Factors influencing implementation of mass drug administration for lymphatic filariasis elimination: a mixed-method study in Odisha, India

Background: Lymphatic filariasis (LF) persists as a public health problem in India. Despite more than ten rounds of mass drug administration (MDA), LF continues to be endemic in the Dhenkanal district of Odisha. Hence, we assessed the coverage and compliance of the MDA program and explored the factors affecting it in the Dhenkanal district.Methods: An explanatory mixed-method study was conducted, wherein for the quantitative survey, 552 participants aged 2 years and above were recruited following a multistage cluster random sampling during February 2022. In-depth interviews were conducted among purposively selected key stakeholders and program implementers. Descriptive statistics were used to report coverage and compliance, along with a 95% confidence interval. Qualitative data were analyzed using a thematic approach.Results: We observed coverage of 99.28% and compliance of 85.87% for MDA drugs. Supervised drug administration proved to be a major pillar in increasing compliance. There was difficulty in administering drugs in urban areas due to gated societies, the absence of individuals during the day, and the perspective toward healthcare providers. Participants reported a lack of confidence in drug distributors and a fear of side effects as major causes for non-compliance.Conclusion: There is a need to strengthen MDA, especially in urban areas. An urban-specific strategy, along with surveillance, behavioral change communication, and the involvement of multi-disciplinary teams, is required

Universal health coverage in India and health technology assessment: current status and the way forward

In India, there is a renewed emphasis on Universal Health Coverage (UHC). Alongside this, Health Technology Assessment (HTA) is an important tool for advancing UHC. The development and application of HTA in India, including capacity building and establishing institutional mechanisms. We emphasized using the HTA approach within two components of the Ayushman Bharat programme, and the section concludes with lessons learned and the next steps. The UHC has increased the importance of selecting and implementing effective technologies and interventions within national health systems, particularly in the context of limited resources. To maximize the use of limited resources and produce reliable scientific assessments, developing and enhancing national capacity must be based on established best practices, information exchange between different sectors, and collaborative approaches. A more potent mechanism and capacity for HTA in India would accelerate the country’s progress toward UHC

Factors associated with poor self-rated health among chronic kidney disease patients and their health care utilization: Insights from LASI wave-1, 2017-18

BackgroundChronic kidney disease (CKD), associated with other chronic conditions affects the physical, behavioral, and psychological aspects of an individual, leading to poor self-rated health. Hence, we aimed to assess the factors associated with poor self-rated health (SRH) in CKD patients. Additionally, we assessed their health care utilization.MethodsThis is an observational study consisting of 527 CKD patients from Longitudinal Aging Study in India (LASI), 2017-2018. A descriptive statistic computed prevalence. Regression analysis assessed the association between poor SRH and socio-demographic variables presented as adjusted odds ratio with a confidence interval of 95%. Health care utilization among CKD patients was graphically presented.ResultsAround 64% of CKD patients had poor SRH. Aged 75 years and above (AOR=1.8, 95% CI= 0.5-6.8), rural residents (AOR= AOR 1.8, 95% CI =1.0 -3.1) and those with other chronic conditions (AOR=5.1, 95% CI= 2.3-11.0) were associated with poor SRH. Overall 79% of the CKD patients availed health care facility, most (44.8%) of those visit private facility.ConclusionWe observed older adults, females, rural residents, and having other chronic conditions were associated with poor SRH among CKD patients which highlights the need for equitable and strengthened health care system. There is an urgent need to provide accessible, affordable and quality healthcare services for these individuals so as to maintain continuity of care