Hierarchical Deep Feature Learning For Decoding Imagined Speech From EEG

We propose a mixed deep neural network strategy, incorporating parallel combination of Convolutional (CNN) and Recurrent Neural Networks (RNN), cascaded with deep autoencoders and fully connected layers towards automatic identification of imagined speech from EEG. Instead of utilizing raw EEG channel data, we compute the joint variability of the channels in the form of a covariance matrix that provide spatio-temporal representations of EEG. The networks are trained hierarchically and the extracted features are passed onto the next network hierarchy until the final classification. Using a publicly available EEG based speech imagery database we demonstrate around 23.45% improvement of accuracy over the baseline method. Our approach demonstrates the promise of a mixed DNN approach for complex spatial-temporal classification problems.Comment: Accepted in AAAI 2019 under Student Abstract and Poster Progra

Towards Automatic Speech Identification from Vocal Tract Shape Dynamics in Real-time MRI

Vocal tract configurations play a vital role in generating distinguishable speech sounds, by modulating the airflow and creating different resonant cavities in speech production. They contain abundant information that can be utilized to better understand the underlying speech production mechanism. As a step towards automatic mapping of vocal tract shape geometry to acoustics, this paper employs effective video action recognition techniques, like Long-term Recurrent Convolutional Networks (LRCN) models, to identify different vowel-consonant-vowel (VCV) sequences from dynamic shaping of the vocal tract. Such a model typically combines a CNN based deep hierarchical visual feature extractor with Recurrent Networks, that ideally makes the network spatio-temporally deep enough to learn the sequential dynamics of a short video clip for video classification tasks. We use a database consisting of 2D real-time MRI of vocal tract shaping during VCV utterances by 17 speakers. The comparative performances of this class of algorithms under various parameter settings and for various classification tasks are discussed. Interestingly, the results show a marked difference in the model performance in the context of speech classification with respect to generic sequence or video classification tasks.Comment: To appear in the INTERSPEECH 2018 Proceeding

Rethinking Semi-Supervised Federated Learning: How to co-train fully-labeled and fully-unlabeled client imaging data

The most challenging, yet practical, setting of semi-supervised federated learning (SSFL) is where a few clients have fully labeled data whereas the other clients have fully unlabeled data. This is particularly common in healthcare settings where collaborating partners (typically hospitals) may have images but not annotations. The bottleneck in this setting is the joint training of labeled and unlabeled clients as the objective function for each client varies based on the availability of labels. This paper investigates an alternative way for effective training with labeled and unlabeled clients in a federated setting. We propose a novel learning scheme specifically designed for SSFL which we call Isolated Federated Learning (IsoFed) that circumvents the problem by avoiding simple averaging of supervised and semi-supervised models together. In particular, our training approach consists of two parts - (a) isolated aggregation of labeled and unlabeled client models, and (b) local self-supervised pretraining of isolated global models in all clients. We evaluate our model performance on medical image datasets of four different modalities publicly available within the biomedical image classification benchmark MedMNIST. We further vary the proportion of labeled clients and the degree of heterogeneity to demonstrate the effectiveness of the proposed method under varied experimental settings.Comment: Published in MICCAI 2023 with early acceptance and selected as 1 of the top 20 poster highlights under the category: Which work has the potential to impact other applications of AI and C

Post-Deployment Adaptation with Access to Source Data via Federated Learning and Source-Target Remote Gradient Alignment

Deployment of Deep Neural Networks in medical imaging is hindered by distribution shift between training data and data processed after deployment, causing performance degradation. Post-Deployment Adaptation (PDA) addresses this by tailoring a pre-trained, deployed model to the target data distribution using limited labelled or entirely unlabelled target data, while assuming no access to source training data as they cannot be deployed with the model due to privacy concerns and their large size. This makes reliable adaptation challenging due to limited learning signal. This paper challenges this assumption and introduces FedPDA, a novel adaptation framework that brings the utility of learning from remote data from Federated Learning into PDA. FedPDA enables a deployed model to obtain information from source data via remote gradient exchange, while aiming to optimize the model specifically for the target domain. Tailored for FedPDA, we introduce a novel optimization method StarAlign (Source-Target Remote Gradient Alignment) that aligns gradients between source-target domain pairs by maximizing their inner product, to facilitate learning a target-specific model. We demonstrate the method's effectiveness using multi-center databases for the tasks of cancer metastases detection and skin lesion classification, where our method compares favourably to previous work. Code is available at: https://github.com/FelixWag/StarAlignComment: This version was accepted for the Machine Learning in Medical Imaging (MLMI 2023) workshop at MICCAI 202