Steady and Time-Dependent MHD Modelling of Jets

International audienceA brief review is given of some results of our work on the construction of (I) steady and (II) time-dependent MHD models for nonrelativistic and relativistic astrophysical outflows and jets, analytically and numerically. The only available exact solutions for MHD outflows are those in separable coordinates, i.e., with the symmetry of radial or meridional self-similarity. Physically accepted solutions pass from the fast magnetosonic separatrix surface in order to satisfy MHD causality. An energetic criterion is outlined for selecting radially expanding winds from cylindrically expanding jets. Numerical simulations of magnetic self-collimation verify the conclusions of analytical steady solutions. We also propose a two-component model consisting of a wind outflow from a central object and a faster rotating outflow launched from a surrounding accretion disk which plays the role of the flow collimator. We also discuss the problem of shock formation during the magnetic collimation of wind-type outflows into jets

A new set of markers for human identification based on 32 polymorphic Alu insertions

A number of genetic systems for human genetic identification based on short tandem repeats or single nucleotide polymorphisms are widely used for crime detection, kinship studies and in analysis of victims of mass disasters. Here, we have developed a new set of 32 molecular genetic markers for human genetic identification based on polymorphic retroelement insertions. Allele frequencies were determined in a group of 90 unrelated individuals from four genetically distant populations of the Russian Federation. The mean match probability and probability of paternal exclusion, calculated based on population data, were 5.53 × 10−14 and 99.784%, respectively. The developed system is cheap and easy to use as compared to all previously published methods. The application of fluorescence-based methods for allele discrimination allows to use the human genetic identification set in automatic and high-throughput formats

The regulated retrotransposon transcriptome of mammalian cells

Although repetitive elements pervade mammalian genomes, their overall contribution to transcriptional activity is poorly defined. Here, as part of the FANTOM4 project, we report that 6–30% of cap-selected mouse and human RNA transcripts initiate within repetitive elements. Analysis of approximately 250,000 retrotransposon-derived transcription start sites shows that the associated transcripts are generally tissue specific, coincide with gene-dense regions and form pronounced clusters when aligned to full-length retrotransposon sequences. Retrotransposons located immediately 5' of protein-coding loci frequently function as alternative promoters and/or express noncoding RNAs. More than a quarter of RefSeqs possess a retrotransposon in their 3' UTR, with strong evidence for the reduced expression of these transcripts relative to retrotransposon-free transcripts. Finally, a genome-wide screen identifies 23,000 candidate regulatory regions derived from retrotransposons, in addition to more than 2,000 examples of bidirectional transcription. We conclude that retrotransposon transcription has a key influence upon the transcriptional output of the mammalian genome