594 research outputs found

    Analysis of bed material of Tanaro River (north -western Italy)

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    On the estimation of the bed-material transport and budget along a river segment: application to the Middle Loire River, France

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    Sediment load and budgets are a fundamental component of the process-based hydromorphological framework developed by the REFORM project, and are needed to accurately assess the current condition of a river, its sensitivity to change, and its likely future evolutionary trajectory. This paper presents an evaluation of three different methods for estimating both bedload sediment transport and bed-material budget within river channels, using the Middle Loire River as a case study. The first method is based on the stream power concept and does not need any hydraulic calculations. It yields estimates of the sediment transport in the same order of magnitude as measurements but poor results for the bed-material budget in terms of magnitude and tendency. For the second method, hydraulic parameters are computed using the Manning–Strickler equation (or a 1D hydraulic model for steady flow). It provides useful indicators for understanding river dynamics but does not yield significant improvements compared to the first method. The third method uses 1D numerical software for water flow and river bed evolution. It yields the most accurate results for both sediment transport and bed evolution but requires more data and overall more work to construct the model. Guidance is provided on the amount of data required, the competence needed to build the models, and the predictive capability of each of the methods

    Chromosomal control of non-gliadin proteins from the 70% ethanol extract of wheat endosperm

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    The non-gliadin fraction of the 70% ethanol extracts of compensated nulli-tetrasomics and ditelosomics of Triticum aestivum cv. Chinese Spring has been analyzed by combined electrofocusing and electrophoresis. Seventeen of the 21 protein map components of the euploid have been ascribed to eight chromosomes: 4A, 3BS, 6BS, 7BS, 3D, 4D, 5D and 7DS. The relationship of the different map components with other proteins previously associated with the same chromosomes is discusse

    STAT3ß, a Splice Variant of Transcription Factor STAT3, Is a Dominant Negative Regulator of Transcription

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    The 89-kDa STAT3 protein is a latent transcription factor which is activated in response to cytokines (interleukin (IL)-5 and -6) and growth factors (epidermal growth factor). Binding of IL-5 to its specific receptor activates JAK2 which leads to the tyrosine phosphorylation of STAT3 proteins. Here we report the cloning of a cDNA encoding a variant of the transcription factor STAT3 (named STAT3b) which was isolated by screening an eosinophil cDNA library. Compared to wild-type STAT3, STAT3b lacks an internal domain of 50 base pairs located near the C terminus. This splice product is a naturally occurring isoform of STAT3 and encodes a 80-kDa protein. We found by reconstitution of the human IL-5R in COS cells that like STAT3, STAT3bis phosphorylated on tyrosine and binds to the pIRE from the ICAM-1 promoter after IL-5 stimulation. However, STAT3b fails to activate a pIRE containing promoter in transient transfection assays. Instead, co-expression of STAT3binhibits the transactivation potential of STAT3. These results suggests that STAT3b functions as a negative regulator of transcription

    Inhibition of vaccinia virus L1 N-myristoylation by the host N-myristoyltransferase inhibitor IMP-1088 generates non-infectious virions defective in cell entry

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    We have recently shown that the replication of rhinovirus, poliovirus and foot-and-mouth disease virus requires the co-translational N-myristoylation of viral proteins by human host cell N-myristoyltransferases (NMTs), and is inhibited by treatment with IMP-1088, an ultrapotent small molecule NMT inhibitor. Here, we examine the importance of N-myristoylation during vaccinia virus (VACV) infection in primate cells and demonstrate the anti-poxviral effects of IMP-1088. N-myristoylated proteins from VACV and the host were metabolically labelled with myristic acid alkyne during infection using quantitative chemical proteomics. We identified VACV proteins A16, G9 and L1 to be N-myristoylated. Treatment with NMT inhibitor IMP-1088 potently abrogated VACV infection, while VACV gene expression, DNA replication, morphogenesis and EV formation remained unaffected. Importantly, we observed that loss of N-myristoylation resulted in greatly reduced infectivity of assembled mature virus particles, characterized by significantly reduced host cell entry and a decline in membrane fusion activity of progeny virus. While the N-myristoylation of VACV entry proteins L1, A16 and G9 was inhibited by IMP-1088, mutational and genetic studies demonstrated that the N-myristoylation of L1 was the most critical for VACV entry. Given the significant genetic identity between VACV, monkeypox virus and variola virus L1 homologs, our data provides a basis for further investigating the role of N-myristoylation in poxviral infections as well as the potential of selective NMT inhibitors like IMP-1088 as broad-spectrum poxvirus inhibitors
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