Mapping Interactions between mRNA Export Factors in Living Cells

The TREX complex couples nuclear mRNA processing events with subsequent export to the cytoplasm. TREX also acts as a binding platform for the mRNA export receptor Nxf1. The sites of mRNA transcription and processing within the nucleus have been studied extensively. However, little is known about where TREX assembly takes place and where Nxf1 is recruited to TREX to form the export competent mRNP. Here we have used sensitized emission Förster resonance energy transfer (FRET) and fluorescence lifetime imaging (FLIM)-FRET, to produce a spatial map in living cells of the sites for the interaction of two TREX subunits, Alyref and Chtop, with Nxf1. Prominent assembly sites for export factors are found in the vicinity of nuclear speckles in regions known to be involved in transcription, splicing and exon junction complex formation highlighting the close coupling of mRNA export with mRNP biogenesis

The role of TREX in gene expression and disease

TRanscription and EXport (TREX) is a conserved multisubunit complex essential for embryogenesis, organogenesis and cellular differentiation throughout life. By linking transcription, mRNA processing and export together, it exerts a physiologically vital role in the gene expression pathway. In addition, this complex prevents DNA damage and regulates the cell cycle by ensuring optimal gene expression. As the extent of TREX activity in viral infections, amyotrophic lateral sclerosis and cancer emerges, the need for a greater understanding of TREX function becomes evident. A complete elucidation of the composition, function and interactions of the complex will provide the framework for understanding the molecular basis for a variety of diseases. This review details the known composition of TREX, how it is regulated and its cellular functions with an emphasis on mammalian systems

Sensitivity of an image plate system in the XUV (60 eV < E < 900 eV)

Phosphor imaging plates (IPs) have been calibrated and proven useful for quantitative x-ray imaging in the 1 to over 1000 keV energy range. In this paper we report on calibration measurements made at XUV energies in the 60 to 900 eV energy range using beamline 6.3.2 at the Advanced Light Source at Lawrence Berkeley National Laboratory. We measured a sensitivity of ~25 plus or minus 15 counts/pJ over the stated energy range which is compatible with the sensitivity of Si photodiodes that are used for time-resolved measurements. Our measurements at 900 eV are consistent with the measurements made by Meadowcroft et al. at ~1 keV.Comment: 7 pages, 2 figure

Effects of breaking up sedentary time with "chair squats" on postprandial metabolism

Prolonged sitting induces adverse metabolic changes. We aimed to determine whether breaking up prolonged sedentary time with short periods of repeated sit-to-stand transitions (“chair squats”) every 20 minutes influences postprandial metabolic responses. Fourteen participants (11 men, 3 women), age 37 ± 16 years, BMI 30.5 ± 3.8 kg.m−2 (mean ± SD) each participated in two experimental trials in random order, in which they arrived fasted, then consumed a test breakfast (8 kcal.kg−1 body weight, 37% energy from fat, 49% carbohydrates, 14% protein) and, 3.5 hours later, an identical test lunch. Expired air and blood samples were taken fasted and for 6.5 hours postprandially. In one trial (SIT) participants sat continuously throughout the observation period; in the “Chair squat” trial (SIT/STAND), participants performed “chair squats” (10 × standing and sitting over 30 seconds, every 20 minutes). Compared to SIT, energy expenditure was 409.7 ± 41.6 kJ (16.6 ± 1.7%) higher in SIT/STAND (p &lt; 0.0001). Postprandial insulin concentrations over the post-breakfast period were 10.9 ± 8.4% lower in SIT/STAND than SIT (p = 0.047), but did not differ between trials in the post-lunch period. Glucose and triglyceride concentrations did not differ significantly between trials. These data demonstrate that a simple, unobtrusive intervention to break up sedentary time can induce some favourable metabolic changes

Optimal normal bases in GF(pn)

AbstractIn this paper the use of normal bases for multiplication in the finite fields GF(pn) is examined. We introduce the concept of an optimal normal basis in order to reduce the hardware complexity of multiplying field elements. Constructions for these bases in GF(2n) and extensions of the results to GF(pn) are presented. This work has applications in crytography and coding theory since a reduction in the complexity of multiplying and exponentiating elements of GF(2n) is achieved for many values of n, some prime

Additive Manufacturing and Physicomechanical Characteristics of PEGDA Hydrogels: Recent Advances and Perspective for Tissue Engineering

In this brief review, we discuss the recent advancements in using poly(ethylene glycol) diacrylate (PEGDA) hydrogels for tissue engineering applications. PEGDA hydrogels are highly attractive in biomedical and biotechnology fields due to their soft and hydrated properties that can replicate living tissues. These hydrogels can be manipulated using light, heat, and cross-linkers to achieve desirable functionalities. Unlike previous reviews that focused solely on material design and fabrication of bioactive hydrogels and their cell viability and interactions with the extracellular matrix (ECM), we compare the traditional bulk photo-crosslinking method with the latest three-dimensional (3D) printing of PEGDA hydrogels. We present detailed evidence combining the physical, chemical, bulk, and localized mechanical characteristics, including their composition, fabrication methods, experimental conditions, and reported mechanical properties of bulk and 3D printed PEGDA hydrogels. Furthermore, we highlight the current state of biomedical applications of 3D PEGDA hydrogels in tissue engineering and organ-on-chip devices over the last 20 years. Finally, we delve into the current obstacles and future possibilities in the field of engineering 3D layer-by-layer (LbL) PEGDA hydrogels for tissue engineering and organ-on-chip devices

The m6A‑methylase complex and mRNA export

During synthesis, mRNA undergoes a number of modifications such as capping, splicing and polyadenylation. These processes are coupled with the orderly deposition of the TREX complex on the mRNA and subsequent recruitment of the NXF1-P15 heterodimer which stimulates the nuclear export of mature mRNAs. mRNAs also undergo a number of internal modifications, the most common of which is the N6‑methyladenosine (m6A) modification. In this review we discuss the recent evidence of coupling between the m6A modification, RNA processing and export

Chiral exponents in O(N) x O(m) spin models at O(1/N^2)

The critical exponents corresponding to chirality are computed at O(1/N^2) in d-dimensions at the stable chiral fixed point of a scalar field theory with an O(N) x O(m) symmetry. Pade-Borel estimates for the exponents are given in three dimensions for the Landau-Ginzburg-Wilson model at m = 2.Comment: 8 latex page

Benzo-dipteridine derivatives as organic cathodes for Li- and Na-ion batteries

Organic-based electrodes for Li- and Na-ion batteries present attractive alternatives to commonly applied inorganic counterparts which can often carry with them supply-chain risks, safety concerns with thermal runaway, and adverse environmental impact. The ability to chemically direct the structure of organic electrodes through control over functional groups is of particular importance, as this provides a route to fine-tune electrochemical performance parameters. Here, we report two benzo-dipteridine derivatives, BF-Me2 and BF-H2, as high-capacity electrodes for use in Li- and Na-ion batteries. These moieties permit binding of multiple Li-ions per molecule while simultaneously ensuring low solubility in the supporting electrolyte, often a precluding issue with organic electrodes. Both display excellent electrochemical stability, with discharge capacities of 142 and 182 mAh g–1 after 100 cycles at a C/10 rate and Coulombic efficiencies of 96% and ∼ 100% demonstrated for BF-Me2 and BF-H2, respectively. The application of a Na-ion cell has also been demonstrated, showing discharge capacities of 88.8 and 137 mAh g–1 after 100 cycles at a C/2 rate for BF-Me2 and BF-H2, respectively. This work provides an encouraging precedent for these and related structures to provide versatile, high-energy density, and long cycle-life electrochemical energy storage materials