Formal conserved quantities for isothermic surfaces

Isothermic surfaces in $S^n$ are characterised by the existence of a pencil $\nabla^t$ of flat connections. Such a surface is special of type $d$ if there is a family $p(t)$ of $\nabla^t$-parallel sections whose dependence on the spectral parameter $t$ is polynomial of degree $d$. We prove that any isothermic surface admits a family of $\nabla^t$-parallel sections which is a formal Laurent series in $t$. As an application, we give conformally invariant conditions for an isothermic surface in $S^3$ to be special.Comment: 13 page

Generalizing the autonomous Kepler Ermakov system in a Riemannian space

We generalize the two dimensional autonomous Hamiltonian Kepler Ermakov dynamical system to three dimensions using the sl(2,R) invariance of Noether symmetries and determine all three dimensional autonomous Hamiltonian Kepler Ermakov dynamical systems which are Liouville integrable via Noether symmetries. Subsequently we generalize the autonomous Kepler Ermakov system in a Riemannian space which admits a gradient homothetic vector by the requirements (a) that it admits a first integral (the Riemannian Ermakov invariant) and (b) it has sl(2,R) invariance. We consider both the non-Hamiltonian and the Hamiltonian systems. In each case we compute the Riemannian Ermakov invariant and the equations defining the dynamical system. We apply the results in General Relativity and determine the autonomous Hamiltonian Riemannian Kepler Ermakov system in the spatially flat Friedman Robertson Walker spacetime. We consider a locally rotational symmetric (LRS) spacetime of class A and discuss two cosmological models. The first cosmological model consists of a scalar field with exponential potential and a perfect fluid with a stiff equation of state. The second cosmological model is the f(R) modified gravity model of {\Lambda}_{bc}CDM. It is shown that in both applications the gravitational field equations reduce to those of the generalized autonomous Riemannian Kepler Ermakov dynamical system which is Liouville integrable via Noether integrals.Comment: Reference [25] update, 21 page

Billiard algebra, integrable line congruences, and double reflection nets

The billiard systems within quadrics, playing the role of discrete analogues of geodesics on ellipsoids, are incorporated into the theory of integrable quad-graphs. An initial observation is that the Six-pointed star theorem, as the operational consistency for the billiard algebra, is equivalent to an integrabilty condition of a line congruence. A new notion of the double-reflection nets as a subclass of dual Darboux nets associated with pencils of quadrics is introduced, basic properies and several examples are presented. Corresponding Yang-Baxter maps, associated with pencils of quadrics are defined and discussed.Comment: 18 pages, 8 figure

Generalized Hamiltonian structures for Ermakov systems

We construct Poisson structures for Ermakov systems, using the Ermakov invariant as the Hamiltonian. Two classes of Poisson structures are obtained, one of them degenerate, in which case we derive the Casimir functions. In some situations, the existence of Casimir functions can give rise to superintegrable Ermakov systems. Finally, we characterize the cases where linearization of the equations of motion is possible

Curvature-direction measures of self-similar sets

We obtain fractal Lipschitz-Killing curvature-direction measures for a large class of self-similar sets F in R^d. Such measures jointly describe the distribution of normal vectors and localize curvature by analogues of the higher order mean curvatures of differentiable submanifolds. They decouple as independent products of the unit Hausdorff measure on F and a self-similar fibre measure on the sphere, which can be computed by an integral formula. The corresponding local density approach uses an ergodic dynamical system formed by extending the code space shift by a subgroup of the orthogonal group. We then give a remarkably simple proof for the resulting measure version under minimal assumptions.Comment: 17 pages, 2 figures. Update for author's name chang

On Some Classes of mKdV Periodic Solutions

We obtain exact periodic solutions of the positive and negative modified Kortweg-de Vries (mKdV) equations. We examine the dynamical stability of these solitary wave lattices through direct numerical simulations. While the positive mKdV breather lattice solutions are found to be unstable, the two-soliton lattice solution of the same equation is found to be stable. Similarly, a negative mKdV lattice solution is found to be stable. We also touch upon the implications of these results for the KdV equation.Comment: 8 pages, 3 figures, to appear in J. Phys.

Breather lattice and its stabilization for the modified Korteweg-de Vries equation

We obtain an exact solution for the breather lattice solution of the modified Korteweg-de Vries (MKdV) equation. Numerical simulation of the breather lattice demonstrates its instability due to the breather-breather interaction. However, such multi-breather structures can be stabilized through the concurrent application of ac driving and viscous damping terms.Comment: 6 pages, 3 figures, Phys. Rev. E (in press

Lattice and q-difference Darboux-Zakharov-Manakov systems via ∂ˉ\bar{\partial}-dressing method

A general scheme is proposed for introduction of lattice and q-difference variables to integrable hierarchies in frame of $\bar{\partial}$-dressing method . Using this scheme, lattice and q-difference Darboux-Zakharov-Manakov systems of equations are derived. Darboux, B\"acklund and Combescure transformations and exact solutions for these systems are studied.Comment: 8 pages, LaTeX, to be published in J Phys A, Letters

Vectorial Ribaucour Transformations for the Lame Equations

The vectorial extension of the Ribaucour transformation for the Lame equations of orthogonal conjugates nets in multidimensions is given. We show that the composition of two vectorial Ribaucour transformations with appropriate transformation data is again a vectorial Ribaucour transformation, from which it follows the permutability of the vectorial Ribaucour transformations. Finally, as an example we apply the vectorial Ribaucour transformation to the Cartesian background.Comment: 12 pages. LaTeX2e with AMSLaTeX package

Computational analysis of anti-HIV-1 antibody neutralization panel data to identify potential functional epitope residues

Advances in single-cell antibody cloning methods have led to the identification of a variety of broadly neutralizing anti–HIV-1 antibodies. We developed a computational tool (Antibody Database) to help identify critical residues on the HIV-1 envelope protein whose natural variation affects antibody activity. Our simplifying assumption was that, for a given antibody, a significant portion of the dispersion of neutralization activity across a panel of HIV-1 strains is due to the amino acid identity or glycosylation state at a small number of specific sites, each acting independently. A model of an antibody’s neutralization IC_(50) was developed in which each site contributes a term to the logarithm of the modeled IC_(50). The analysis program attempts to determine the set of rules that minimizes the sum of the residuals between observed and modeled IC_(50) values. The predictive quality of the identified rules may be assessed in part by whether there is support for rules within individual viral clades. As a test case, we analyzed antibody 8ANC195, an anti-glycoprotein gp120 antibody of unknown specificity. The model for this antibody indicated that several glycosylation sites were critical for neutralization. We evaluated this prediction by measuring neutralization potencies of 8ANC195 against HIV-1 in vitro and in an antibody therapy experiment in humanized mice. These experiments confirmed that 8ANC195 represents a distinct class of glycan-dependent anti–HIV-1 antibody and validated the utility of computational analysis of neutralization panel data