Prevalence and new histopathological aspects of Haemoproteus spp. in pigeons from Iran

ΔΕΝ ΔΙΑΤΙΘΕΤΑΙ ΠΕΡΙΛΗΨΗHaemoproteus spp. is pathogenic protozoan that effecting blood circulatory system of birds. The present study was undertaken to evaluate the presence of Haemoproteus spp. in pigeons from Iran and associatedhistopathological changes. A total of 108 blood samples were taken from pigeons to investigate Haemoproteus spp. presence by blood smear and semi-nested PCR targeting the cytochrome b gene methods. Also, to evaluate histopathological changes 12 infected pigeons to Haemoproteus were sacrificed and studied. 34.2% of pigeons infected with Haemoproteus showed macro and microgametocytes in their erythrocytes while based on the molecular method 63.8% were infected. Focal lymphocytic aggregates, pigmentation and cell swelling were the main histopathological lesions in infected livers. Multifocal non- suppurative interstitial nephritis, pigmentation and splenic lymphoid hyperplasia were also seen in the infected pigeons. Mild lymphocytic myocarditis in the heart of one pigeon was the other finding. No histopathological changes were seen in brain, intestine, and pancreas. Schizonts with variable shapes and sizes were detected in infected livers, lungs, kidneys, and spleens but megaloschizonts were not found. This study also reports the molecular prevalence of Haemoproteus spp. in Ira

Halotolerant Ability and α-Amylase Activity of Some Saltwater Fungal Isolates

Four halotolerant fungal isolates originating from the saltwater Lake Urmia in Iran were selected during a screening program for salt resistance and α-amylase activity. The isolates were identified based on sequencing the ITS region and a part of the β-tubulin gene, as Penicillium chrysogenum (isolate U1; CBS 132820), Fusarium incarnatum (isolate U2; CBS 132821), and Penicillium polonicum (isolate U3; CBS 132822, and isolate U4; CBS 132823). The growth of these isolates was determined by measuring the colony diameter and mycelia dry weight in Sabouraud dextrose agar and yeast nitrogen base medium supplemented with NaCl, KCl, and LiCl. Isolate U4 showed a growth up in 15% NaCl and U1 was the only isolate that could grow in 20% KCl. None of the strains grew in a media containing LiCl. The salt supplemented medium did not increase the size of colony diameter in all isolates (p > 0.05). The ability of the selected isolates for amylase production was quantitatively tested and showed that P. polonicum isolate U4 was the most potent producer of amylase with a yield of 260.9 U/L after 60 h, whereas P. polonicum isolate U3 was the lowest one with a production level of 97.9 U/L after 48 h. P. polonicum isolate U4 could be a suitable candidate for production of amylase on an industrial scale after optimization. © 2013 by School of Pharmacy

Validation of 3D Model-Based Maximum-Likelihood Estimation of Normalisation Factors for Partial Ring Positron Emission Tomography

The next generation of organ specific Positron Emission Tomography (PET) scanners, e.g. for breast imaging, will use partial ring geometries. We propose a component-based Maximum-Likelihood (ML) estimation of normalisation factors for 3D PET data reconstruction applicable to partial ring geometries. This method is based on the Software for Tomographic Image Reconstruction (STIR) for full ring PET and is validated for a stationary partial ring scanner. The model includes the estimation for crystal efficiencies and geometric factors. The algorithm is validated using Maximum Likelihood Estimation Method (MLEM) based 3D reconstruction in STIR using Geant4 Application for Tomographic Emission (GATE) simulation data for full and partial ring scanners and experimental data from a demonstrator with partial ring geometry. The uniformity of the reconstructed images of simulated cylindrical and NEMAIQ phantoms in both scanner geometries and the image of a line source in the partial ring demonstrator is assessed. The results have shown that uniform images in both axial and transaxial directions are obtained after applying the estimated normalisation factors. The accuracy of the algorithm is validated by comparing the normalisation factors between the full and partial ring systems in simulation. We have shown that the estimated normalisation factors are almost identical, even though the separate components are not. This proves that the ML estimation of the 3D normalisation factors is valid and can be applied to the partial ring scanner

The Antibacterial Effect of Low Temperature Stored Amnion on Growth of Escherichia Coli, Staphylococcus Aureus and Pseudomonas Aeruginosa

BACKGROUND AND OBJECTIVE: Amniotic membrane (AM) has a lot of applied properties like anti-bacterial characteristic mediated by peptides such as elafin. Because of limitations in use of freshly prepared tissue, there are various methods for long-term preservation of amniotic membrane. This study was conducted to determine the effect of cryopreservation, as one of the common methods of preservation of amniotic membrane, on its antibacterial property against the growth of commonly occurring bacteria in the clinic. METHODS: In this experimental study, the effect of fresh AM (from elective Cesarean) and cryopreserved (by 10% DMSO) AM on the growth of three standard bacterial strains including Escherichia coli ATCC 25922, Staphylococcus aureus, Pseudomonas aeruginosa and two clinical isolated strains of E.coli were evaluated using disk diffusion test. In this method, pieces of fresh or cryopreserved AM was placed in the culture plate after bacterial culturing. After incubation, the number of plates with inhibition zone and amount of inhibition zone were measured. The amount of elafin was measured in AM samples using ELISA. RESULTS: Fresh AM inhibit the growth of Pseudomonas aeruginosa and two clinical isolated strains of E.coli. However, it has no effect on the growth of standard strain of Escherichia coli and Staphylococcus aureus strain. There is no difference in the number of plates including inhibition zone between fresh and cryopreserved AM. The amount of elafin decreased significantly in cryopreserved AM (p<0.01). CONCLUSION: The results of this study showed that the anti-bacterial property of the AM depends on bacterial species. In addition, the cryopreservation process maintains anti-bacterial properties of amniotic stem cells

Updates in Rhea - an expert curated resource of biochemical reactions.

Rhea (http://www.rhea-db.org) is a comprehensive and non-redundant resource of expert-curated biochemical reactions designed for the functional annotation of enzymes and the description of metabolic networks. Rhea describes enzyme-catalyzed reactions covering the IUBMB Enzyme Nomenclature list as well as additional reactions, including spontaneously occurring reactions, using entities from the ChEBI (Chemical Entities of Biological Interest) ontology of small molecules. Here we describe developments in Rhea since our last report in the database issue of Nucleic Acids Research. These include the first implementation of a simple hierarchical classification of reactions, improved coverage of the IUBMB Enzyme Nomenclature list and additional reactions through continuing expert curation, and the development of a new website to serve this improved dataset

Analytical, experimental and numerical study of a graded honeycomb structure under in-plane impact load with low velocity

Given the significance of energy absorption in various industries, light shock absorbers such as honeycomb structure under in-plane and out-of-plane loads have been in the core of attention. The purpose of this research is the analyses of graded honeycomb structure (GHS) behaviour under in-plane impact loading and its optimisation. Primarily, analytical equations for plateau stress and specific energy are represented, taking power hardening model (PHM) and elastic–perfectly plastic model (EPPM) into consideration. For the validation and comparison of acquired analytical equations, the energy absorption of a GHS made of five different aluminium grades is simulated in ABAQUS/CAE. In order to validate the numerical simulation method in ABAQUS, an experimental test has been conducted as the falling a weight with low velocity on a GHS. Numerical results retain an acceptable accordance with experimental ones with a 5.4% occurred error of reaction force. For a structure with a specific kinetic energy, the stress–strain diagram is achieved and compared with the analytical equations obtained. The maximum difference between the numerical and analytical plateau stresses for PHM is 10.58%. However, this value has been measured to be 38.78% for EPPM. In addition, the numerical value of absorbed energy is compared to that of analytical method for two material models. The maximum difference between the numerical and analytical absorbed energies for PHM model is 6.4%, while it retains the value of 48.08% for EPPM. Based on the conducted comparisons, the numerical and analytical results based on PHM are more congruent than EPPM results. Applying sequential quadratic programming method and genetic algorithm, the ratio of structure mass to the absorbed energy is minimised. According to the optimisation results, the structure capacity of absorbing energy increases by 18% compared to the primary model

Constraints on the χ_(c1) versus χ_(c2) polarizations in proton-proton collisions at √s = 8 TeV

The polarizations of promptly produced χ_(c1) and χ_(c2) mesons are studied using data collected by the CMS experiment at the LHC, in proton-proton collisions at √s=8  TeV. The χ_c states are reconstructed via their radiative decays χ_c → J/ψγ, with the photons being measured through conversions to e⁺e⁻, which allows the two states to be well resolved. The polarizations are measured in the helicity frame, through the analysis of the χ_(c2) to χ_(c1) yield ratio as a function of the polar or azimuthal angle of the positive muon emitted in the J/ψ → μ⁺μ⁻ decay, in three bins of J/ψ transverse momentum. While no differences are seen between the two states in terms of azimuthal decay angle distributions, they are observed to have significantly different polar anisotropies. The measurement favors a scenario where at least one of the two states is strongly polarized along the helicity quantization axis, in agreement with nonrelativistic quantum chromodynamics predictions. This is the first measurement of significantly polarized quarkonia produced at high transverse momentum