2,084 research outputs found
Charge-Fluctuation-Induced Non-analytic Bending Rigidity
In this Letter, we consider a neutral system of mobile positive and negative
charges confined on the surface of curved films. This may be an appropriate
model for: i) a highly charged membrane whose counterions are confined to a
sheath near its surface; ii) a membrane composed of an equimolar mixture of
anionic and cationic surfactants in aqueous solution. We find that the charge
fluctuations contribute a non-analytic term to the bending rigidity that varies
logarithmically with the radius of curvature. This may lead to spontaneous
vesicle formation, which is indeed observed in similar systems.Comment: Revtex, 9 pages, no figures, submitted to PR
Role of Multipoles in Counterion-Mediated Interactions between Charged Surfaces: Strong and Weak Coupling
We present general arguments for the importance, or lack thereof, of the
structure in the charge distribution of counterions for counterion-mediated
interactions between bounding symmetrically charged surfaces. We show that on
the mean field or weak coupling level, the charge quadrupole contributes the
lowest order modification to the contact value theorem and thus to the
intersurface electrostatic interactions. The image effects are non-existent on
the mean-field level even with multipoles. On the strong coupling level the
quadrupoles and higher order multipoles contribute additional terms to the
interaction free energy only in the presence of dielectric inhomogeneities.
Without them, the monopole is the only multipole that contributes to the strong
coupling electrostatics. We explore the consequences of these statements in all
their generality.Comment: 12 pages, 3 figure
Crowding Promotes the Switch from Hairpin to Pseudoknot Conformation in Human Telomerase RNA
Formation of a pseudoknot in the conserved RNA core domain in the
ribonucleoprotein human telomerase is required for function. In vitro
experiments show that the pseudoknot (PK) is in equilibrium with an extended
hairpin (HP) structure. We use molecular simulations of a coarse-grained model,
which reproduces most of the salient features of the experimental melting
profiles of PK and HP, to show that crowding enhances the stability of PK
relative to HP in the wild type and in a mutant associated with dyskeratosis
congenita. In monodisperse suspensions, small crowding particles increase the
stability of compact structures to a greater extent than larger crowders. If
the sizes of crowders in a binary mixture are smaller than the unfolded RNA,
the increase in melting temperature due to the two components is additive. In a
ternary mixture of crowders that are larger than the unfolded RNA, which mimics
the composition of ribosome, large enzyme complexes and proteins in E. coli,
the marginal increase in stability is entirely determined by the smallest
component. We predict that crowding can restore partially telomerase activity
in mutants, which dramatically decrease the PK stability.Comment: File "JACS_MAIN_archive_PDF_from_DOC.pdf" (PDF created from DOC)
contains the main text of the paper File JACS_SI_archive.tex + 7 figures are
the supplementary inf
Membranes in rod solutions: a system with spontaneously broken symmetry
We consider a dilute solution of infinitely rigid rods near a curved,
perfectly repulsive surface and study the contribution of the rod depletion
layer to the bending elastic constants of membranes. We find that a spontaneous
curvature state can be induced by exposure of BOTH sides of the membrane to a
rod solution. A similar result applies for rigid disks with a diameter equal to
the rod's length. We also study the confinement of rods in spherical and
cylindrical repulsive shells. This helps elucidate a recent discussion on
curvature effects in confined quantum mechanical and polymer systems.Comment: 10 pages, 2 figures, 1 table; submitted to PR
Electrolytic depletion interactions
We consider the interactions between two uncharged planar macroscopic
surfaces immersed in an electrolyte solution which are induced by interfacial
selectivity. These forces are taken into account by introducing a depletion
free-energy density functional, in addition to the usual mean-field
Poisson-Boltzmann functional. The minimization of the total free-energy
functional yields the density profiles of the microions and the electrostatic
potential. The disjoining pressure is obtained by differentiation of the total
free energy with respect to the separation of the surfaces, holding the range
and strength of the depletion forces constant. We find that the induced
interaction between the two surfaces is always repulsive for sufficiently large
separations, and becomes attractive at shorter separations. The nature of the
induced interactions changes from attractive to repulsive at a distance
corresponding to the range of the depletion forces.Comment: 17 pages, 4 Postscript figures, submitted to Physical Review
Effective interactions between star polymers and colloidal particles
Using monomer-resolved Molecular Dynamics simulations and theoretical
arguments based on the radial dependence of the osmotic pressure in the
interior of a star, we systematically investigate the effective interactions
between hard, colloidal particles and star polymers in a good solvent. The
relevant parameters are the size ratio q between the stars and the colloids, as
well as the number of polymeric arms f (functionality) attached to the common
center of the star. By covering a wide range of q's ranging from zero (star
against a flat wall) up to about 0.75, we establish analytical forms for the
star-colloid interaction which are in excellent agreement with simulation
results. A modified expression for the star-star interaction for low
functionalities, f < 10 is also introduced.Comment: 37 pages, 14 figures, preprint-versio
Strong Coupling Electrostatics in the Presence of Dielectric Inhomogeneities
We study the strong-coupling (SC) interaction between two like-charged
membranes of finite thickness embedded in a medium of higher dielectric
constant. A generalized SC theory is applied along with extensive Monte-Carlo
simulations to study the image charge effects induced by multiple dielectric
discontinuities in this system. These effects lead to strong counterion
crowding in the central region of the inter-surface space upon increasing the
solvent/membrane dielectric mismatch and change the membrane interactions from
attractive to repulsive at small separations. These features agree
quantitatively with the SC theory at elevated couplings or dielectric mismatch
where the correlation hole around counterions is larger than the thickness of
the central counterion layer.Comment: 4 pages, 3 figure
Dynamics Among Borderline Personality and Anxiety Features in Psychotherapy Outpatients: An Exploration of Nomothetic and Idiographic Patterns
Borderline personality disorder (BPD) involves instability in self-concept, emotions, and behavior. However, the dynamic, longitudinal relations among BPD symptoms and between these symptoms and other problematic emotional experiences are poorly understood. It is also unclear whether these dynamics are the same across persons (including across diagnostic boundaries), specific to individuals with BPD, or idiographic. The current study uses ecological momentary assessment and Group Iterative Multiple Model Estimation (GIMME), a novel, data-driven approach to identifying dynamic patterns in time-series data at group, subgroup, and individual levels, to investigate the dynamic connections among select features of BPD (anger, impulsivity, and identity disturbance) and anxiety-related experiences. Forty-two psychiatric outpatients diagnosed with BPD (n = 27) or with an anxiety disorder, but not BPD (n = 15) rated their anger, identity disturbance, impulsivity, anxiety, stress, and calmness states six times per day for 21 days, providing a total of 4,699 surveys. Only one dynamic link between symptoms was identified that applied at the group level, and GIMME did not reveal stable subgroups of individuals with distinct symptom dynamics. Instead, these dynamics differed from individual to individual. These results suggest that connections among these BPD and anxiety symptoms do not depend on diagnosis and are somewhat idiographic. Case examples are used to illustrate the clinical utility of within-person symptom models as a supplement to traditional diagnostic information
100 Years of Earth System Model Development
This is the final version. Available from American Meteorological Society via the DOI in this recordToday’s global Earth System Models began as simple regional models of tropospheric weather systems. Over the past century, the physical realism of the models has steadily increased, while the scope of the models has broadened to include the global troposphere and stratosphere, the ocean, the vegetated land surface, and terrestrial ice sheets. This chapter gives an approximately chronological account of the many and profound conceptual and technological advances that made today’s models possible. For brevity, we omit any discussion of the roles of chemistry and biogeochemistry, and terrestrial ice sheets
A stochastic model for heart rate fluctuations
Normal human heart rate shows complex fluctuations in time, which is natural,
since heart rate is controlled by a large number of different feedback control
loops. These unpredictable fluctuations have been shown to display fractal
dynamics, long-term correlations, and 1/f noise. These characterizations are
statistical and they have been widely studied and used, but much less is known
about the detailed time evolution (dynamics) of the heart rate control
mechanism. Here we show that a simple one-dimensional Langevin-type stochastic
difference equation can accurately model the heart rate fluctuations in a time
scale from minutes to hours. The model consists of a deterministic nonlinear
part and a stochastic part typical to Gaussian noise, and both parts can be
directly determined from the measured heart rate data. Studies of 27 healthy
subjects reveal that in most cases the deterministic part has a form typically
seen in bistable systems: there are two stable fixed points and one unstable
one.Comment: 8 pages in PDF, Revtex style. Added more dat
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