Intramolecular vibrational energy redistribution as state space diffusion: Classical-quantum correspondence

We study the intramolecular vibrational energy redistribution (IVR) dynamics of an effective spectroscopic Hamiltonian describing the four coupled high frequency modes of CDBrClF. The IVR dynamics ensuing from nearly isoenergetic zeroth-order states, an edge (overtone) and an interior (combination) state, is studied from a state space diffusion perspective. A wavelet based time-frequency analysis reveals an inhomogeneous phase space due to the trapping of classical trajectories. Consequently the interior state has a smaller effective IVR dimension as compared to the edge state.Comment: 5 pages, 3 figure

Irreversible EGFR Inhibitor EKB-569 Targets Low-LET γ-Radiation-Triggered Rel Orchestration and Potentiates Cell Death in Squamous Cell Carcinoma

EKB-569 (Pelitinib), an irreversible EGFR tyrosine kinase inhibitor has shown potential therapeutic efficiency in solid tumors. However, cell-killing potential in combination with radiotherapy and its underlying molecular orchestration remain to be explored. The objective of this study was to determine the effect of EKB-569 on ionizing radiation (IR)-associated NFκB-dependent cell death. SCC-4 and SCC-9 cells exposed to IR (2Gy) with and without EKB-569 treatment were analyzed for transactivation of 88 NFκB pathway molecules, NFκB DNA-binding activity, translation of the NFκB downstream mediators, Birc1, 2 and 5, cell viability, metabolic activity and apoptosis. Selective targeting of IR-induced NFκB by EKB-569 and its influence on cell-fate were assessed by overexpressing (p50/p65) and silencing (ΔIκBα) NFκB. QPCR profiling after IR exposure revealed a significant induction of 74 NFκB signal transduction molecules. Of those, 72 were suppressed with EKB-569. EMSA revealed a dose dependent inhibition of NFκB by EKB-569. More importantly, EKB-569 inhibited IR-induced NFκB in a dose-dependent manner, and this inhibition was sustained up to at least 72 h. Immunoblotting revealed a significant suppression of IR-induced Birc1, 2 and 5 by EKB-569. We observed a dose-dependent inhibition of cell viability, metabolic activity and apoptosis with EKB-569. EKB-569 significantly enhanced IR-induced cell death and apoptosis. Blocking NFκB improved IR-induced cell death. Conversely, NFκB overexpression negates EKB-569 -induced cell-killing. Together, these pre-clinical data suggest that EKB-569 is a radiosensitizer of squamous cell carcinoma and may mechanistically involve selective targeting of IR-induced NFκB-dependent survival signaling. Further pre-clinical in-vivo studies are warranted

Structure of a translocation signal domain mediating conjugative transfer by Type IV secretion systems

Relaxases are proteins responsible for the transfer of plasmid and chromosomal DNA from one bacterium to another during conjugation. They covalently react with a specific phosphodiester bond within DNA origin of transfer sequences, forming a nucleo-protein complex which is subsequently recruited for transport by a plasmid-encoded type IV secretion system. In previous work we identified the targeting translocation signals presented by the conjugative relaxase TraI of plasmid R1. Here we report the structure of TraI translocation signal TSA. In contrast to known translocation signals we show that TSA is an independent folding unit and thus forms a bona fide structural domain. This domain can be further divided into three sub-domains with striking structural homology with helicase sub-domains of the SF1B family. We also show that TSA is part of a larger vestigial helicase domain which has lost its helicase activity but not its single-stranded DNA binding capability. Finally, we further delineate the binding site responsible for translocation activity of TSA by targeting single residues for mutations. Overall, this study provides the first evidence that translocation signals can be part of larger structural scaffolds, overlapping with translocation-independent activities

(3E,5E)-1-Benzyl-3,5-bis­(2-fluoro­benzyl­idene)piperidin-4-one

The inversion-related mol­ecules of the title compound, C26H21F2NO, associate into closed dimeric subunits via co-operative C—H⋯π inter­actions. Two non-classical C—H⋯O and one C—H⋯N intra­molecular hydrogen bonds are also found in the crystal structure. The piperidin-4-one ring adopts a sofa conforamtion with the 1-benzyl group in the equatorial position, and the equiplanar fluoro­phenyl substituents in the 3- and 5-positions stretched out on either side. The 1-benzyl group is disposed towards the substituent in the 6th position of the piperidin-4-one ring. The 3,5-diene units possess E configurations

Joining of Cu to SS304 by microwave hybrid heating with Ni as interlayer

[EN] Joining of dissimilar pure Copper (Cu) to Stainless Steel (SS304) is necessitated in many industrial applications such as heat exchangers and electrical contacts. Advantages of both the materials such as high electrical conductivity of copper and better corrosion resistance of SS304 can be harnessed by way of joining both the metals. However, joining to Cu to itself or other materials is a challenge since the input heat is dissipated rapidly. Most of the conventional welding methods such as arc and gas are incompetent and unconventional methods such as Explosion Welding, EBW, and Diffusion Bonding are very expensive. In this study a new economical process of joining of dissimilar metals i.e. Cu to SS304 by microwave hybrid heating is investigated. Microwave joining is made possible by applying a powder (in this work, Nickel metal powder) as an interlayer and exposing to microwave surrounding the interlayer with a susceptor. The interlayer of Ni powder having average size 200nm and 45μm was used. The microstructure of the joint was studied by optical microscope and scanning electron microscope. The joints formed with 200nm Ni powder were observed to have a defect free microstructure. The EDS and XRD analysis determine the formation of solid solution between Cu-Ni interface and an intermetallic compound at Fe-Ni interface. The diffusion of elements across the joint was further analyzed by EDS line scan. The hardness variation was studied by Vickers’ micro-hardness. It can be concluded that smaller size Ni heats up faster in microwave and produce stronger joint of Cu to SS304 by microwave hybrid heatingTamang, S.; Aravindan, S. (2019). Joining of Cu to SS304 by microwave hybrid heating with Ni as interlayer. En AMPERE 2019. 17th International Conference on Microwave and High Frequency Heating. Editorial Universitat Politècnica de València. 98-104. https://doi.org/10.4995/AMPERE2019.2019.9813OCS9810

(3E,5E)-3,5-Bis(4-allyl­oxybenzyl­idene)-1-benzyl­piperidin-4-one

In the title compound C32H31NO3, the all­yloxy groups on either side of the piperidin-4-one ring are conformationally disordered. The contribution of major and minor components of the allyloxy group at the 3rd position of the ring are 0.576 (4) and 0.424 (4), respectively, and those at the 5th position are 0.885 (3) and 0.115 (3), respectively. The six-membered piperidin-4-one ring adopts a sofa conformation with the benzyl group occupying an equatorial position and the olefinic double bonds possessing an E configuration. Flanking phenyl substituents are stretched out on either side of the six-membered ring. π–π inter­actions with a centroid–centroid distance of 3.885 (1) Å give rise to mol­ecular dimers and short C—H⋯π contacts lead to chains along the c axis