58 research outputs found

    Überblick über Spurenelemente in Böden der Aue der Mittleren Elbe

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    Floodplain soils across the Central Elbe River, Germany, have unique features. These soils vary considerably in their properties due to rapid fluvial processes and in metal contents due to frequent industrial discharge into the river. Although there have been works studying such soils, there has never been a comprehensive study that would monitor a large number of entire soil profiles along the Elbe River. Our aim was to describe the main properties of 94 profiles representing different soils along the Elbe River, their content from 15 potentially toxic elements (PTEs) in various depths, and assess various soil contamination and health risk indices. We measured soil properties auch as pH, organic carbon (OC), particle size distribution, as well as total concentrations of aluminium (Al), arsenic (As), barium (Ba), chromium (Cr), copper (Cu), iron (Fe), manganese (Mn), lead (Pb), nickel (Ni), rubidium (Rb), strontium (Sr), tin (Sn), vanadium (V), zirconium (Zr), and zinc (Zn) in all soil profiles. We presented the data for all soil horizons and in top- (0-30 cm depth) and subsoil (>30 cm depth). We found that pH, OC, and clay differed significantly between top- and subsoil horizons reflecting different water regimes and other factors. On the other hand, Al, Fe, and Mn were not affected significantly by depth. Among the studied PTEs, Sn was found to be generating the highest values in Contamination Factor, Geoaccumulation Index, and Enrichment Factor; it was followed by As, Zn, and Pb. Other PTEs such as Ba, Rb, Sr, V, and Zr, and exhibited much lower soil contamination index values. The Pollution Load Index was very high. Health risk assessment indicated rather unexpectedly that Zr was the primary contributor to total risk. We conclude that in multi-element contamination cases, even PTEs with low soil concentrations (such as Zr here) may have predominant role in the risk related to soil contamination

    Interplay between pleiotropy and secondary selection determines rise and fall of mutators in stress response

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    Dramatic rise of mutators has been found to accompany adaptation of bacteria in response to many kinds of stress. Two views on the evolutionary origin of this phenomenon emerged: the pleiotropic hypothesis positing that it is a byproduct of environmental stress or other specific stress response mechanisms and the second order selection which states that mutators hitchhike to fixation with unrelated beneficial alleles. Conventional population genetics models could not fully resolve this controversy because they are based on certain assumptions about fitness landscape. Here we address this problem using a microscopic multiscale model, which couples physically realistic molecular descriptions of proteins and their interactions with population genetics of carrier organisms without assuming any a priori fitness landscape. We found that both pleiotropy and second order selection play a crucial role at different stages of adaptation: the supply of mutators is provided through destabilization of error correction complexes or fluctuations of production levels of prototypic mismatch repair proteins (pleiotropic effects), while rise and fixation of mutators occur when there is a sufficient supply of beneficial mutations in replication-controlling genes. This general mechanism assures a robust and reliable adaptation of organisms to unforeseen challenges. This study highlights physical principles underlying physical biological mechanisms of stress response and adaptation

    2ʹ-Deoxyadenosine 5ʹ-diphosphoribose is an endogenous TRPM2 superagonist

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    Transient receptor potential melastatin 2 (TRPM2) is a ligand-gated Ca2+-permeable nonselective cation channel. Whereas physiological stimuli, such as chemotactic agents, evoke controlled Ca2+ signals via TRPM2, pathophysiological stimuli such as reactive oxygen species and genotoxic stress result in prolonged TRPM2-mediated Ca2+ entry and, consequently, apoptosis. To date, adenosine 5'-diphosphoribose (ADPR) has been assumed to be the main agonist for TRPM2. Here we show that 2'-deoxy-ADPR was a significantly better TRPM2 agonist, inducing 10.4-fold higher whole-cell currents at saturation. Mechanistically, this increased activity was caused by a decreased rate of inactivation and higher average open probability. Using high-performance liquid chromatography (HPLC) and mass spectrometry, we detected endogenous 2'-deoxy-ADPR in Jurkat T lymphocytes. Consistently, cytosolic nicotinamide mononucleotide adenylyltransferase 2 (NMNAT-2) and nicotinamide adenine dinucleotide (NAD)-glycohydrolase CD38 sequentially catalyzed the synthesis of 2'-deoxy-ADPR from nicotinamide mononucleotide (NMN) and 2'-deoxy-ATP in vitro. Thus, 2'-deoxy-ADPR is an endogenous TRPM2 superagonist that may act as a cell signaling molecule

    Co-expression network analysis reveals transcription factors associated to cell wall biosynthesis in sugarcane

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    Health risk assessment of potentially toxic elements in soils along the Central Elbe River, Germany

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    Floodplain soils across Central Elbe River (CER), Germany, vary considerably in potentially toxic element (PTE) content. However, there has never been a comprehensive study that links PTE levels with human health risk for children and adults. Our objective was to determine the contamination of 13 PTEs in 94 soil profiles along CER and assess the associated health risk via diverse indices for adults and children. Of 94 soil profiles, we measured soil properties and total content of arsenic, barium, chromium, copper, nickel, lead, rubidium, tin, strontium, vanadium, zinc, and zirconium using x-ray fluorescence spectrometer (XRF). We calculated the Contamination Factor and the Pollution Load Index (PLI), and assessed the health risk for male and female adults as well as for children. Topsoil median contents of Cr (84 mg kg−1), Cu (42), Ni (33), and Zn (195) exceeded the Precautionary Values for sandy soils according to the German Federal Soil Protection and Contaminated Sites Ordinance, while As, Pb, and V were 32, 73, and 77 mg kg−1, respectively. Median topsoil PLI was 1.73, indicating elevated multi-element contamination, with 90th percentile and maximum values being 3.20 and 4.31, respectively. All PTE concentrations were higher in top- compared to subsoils. Also at the 50th percentile the most enriched elements were Sn and As, followed by Zr and Rb, while in the 90th percentile Sn and As were followed by Zn, Pb and Cu. Median children's hazard index (HI) was higher than unity (HI = 2.27) and the 90th percentile was 5.53, indicating elevated health risk. Adult median HIs were 0.18 for male and 0.21 for female persons. Arsenic was found to be the primary contributor to total risk, accounting of 57.4% of HI in all three-person groupings, with Cr (17.3%) being the second, and V (10.2%) the third. Children's health is at dramatically higher risk than that of adults; also As, Cr, Pb, and V have a predominant role in contamination-related health risks. The presence of V, a less-expected element, among those of major risk contribution, reveals the necessity of monitoring areas at large scale. Our results demonstrate that our study may serve as a model for similar works studying multi-element-contaminated areas in future. © 2019 The Author

    Multiple sclerosis: The elevated antibody response to Epstein-Barr virus primarily targets, but is not confined to, the glycine-alanine repeat of Epstein-Barr nuclear antigen-1

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    Patients with multiple sclerosis (MS) have elevated antibodies against Epstein-Barr virus (EBV), but data on the epitope-resolved specificity of these antibodies are scarce. Using a peptide microarray containing 1465 peptides representing 8 full-length EBV proteins, we identified higher (p<0.001) antibody reactivities to 39 EBV-peptides in MS patients (n=29) compared to healthy controls (n=22). Seventeen of the 39 peptides were from EBNA-1 and 13 located within the glycine-alanine repeat of EBNA-1. Further reactivities were directed against EBNA-3, EBNA-4, EBNA-6, VP26, and LMP1. Thus, antibodies against EBV in MS patients primarily target, but are not confined to, the glycine-alanine repeat of EBNA-1
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