Additional file 2: Table S2. of The effect of maternal undernutrition on the rat placental transcriptome: protein restriction up-regulates cholesterol transport

Primer sequences for quantitative real-time PCR. (DOCX 23 kb

MOESM2 of RNA expression of TLR10 in normal equine tissues

Additional file 2. TLR 1-4 and 6-10 RNA expression in horse tissues. Peripheral blood mononucleolyte cells (PBMC) from two horses (A–B) and tissues (Kidney (C), Liver (D), Mesenteric Lymph Node (E), Spleen (F) and Jejunum (G)) from a third. Y axis = Reads per kilobase per million base pairs (RPKM), X axis = TLR gene

Principal component analysis for metabolic profiles obtained from an analysis of the phenotypic microarray data set.

<p>ST131 strains are denoted by red blocks, and non-ST131 strains by blue blocks.</p

Details of strains used in the phenotypic microarray assay.

<p>Details of strains used in the phenotypic microarray assay.</p

Cluster heat map showing the signal values of <i>E. coli</i> ST131 and non-ST131 isolates obtained from 190 biochemical tests using PM assay, with red showing no utilisation through to green showing high levels of utilisation.

<p>A UPGMA dendrogram informed by the metabolic profile is presented above the heatmap. ST131 strains are represented by red blocks, and non-ST131 strains by blue blocks.</p

MOESM1 of RNA expression of TLR10 in normal equine tissues

Additional file 1. Additional tables

ACT comparisons of the (A) <i>idn</i> (B) <i>ydd</i> and (C) <i>asc</i> loci from CFT073 (upper genome) and the core ST131 genome (lower genome).

<p>ACT comparisons of the (A) <i>idn</i> (B) <i>ydd</i> and (C) <i>asc</i> loci from CFT073 (upper genome) and the core ST131 genome (lower genome).</p

Heat map showing a comparison of results obtained from testing 25 API biochemical substrates on <i>E. coli</i> ST131 and four major ExPEC STs representing the whole substrates used in phenotypic profiling assay.

<p>Darker shaded areas indicate higher percentage of strains capable of utilizing the substrate. The inability of ST131 to utilise 5KG, Dulcitol (DUL), DARA, cellobiose and esculin is highlighted by red circle.</p