Mapping one year of cholera morbidity and mortality rates in Haiti.

<p>The colored scales represent yearly attack (a) and mortality (b) rates per 10,000 inhabitants in communes of Haiti (from October 16, 2010 to October 15, 2011).</p

Impact of local environmental factors during each epidemic phase.

<p>Standardized incidence ratios (p-values) were estimated using the multivariate regression model.</p>*<p>Factor excluded using stepwise analysis.</p>†<p>Significant factors (boldface).</p>‡<p>Non-significant factors kept using stepwise analysis.</p

Spectral analysis of time series.

<p>Analysis of cases (a), rainfall (b), and cross-wavelet (c) between cases and rainfall are presented. The Y-axes represent length of the wavelet analysis window (from 3 to 26 days) and the color scales represent the spectral values for each length of the analysis window.</p

Association between risk of visceral leishmaniasis and class of environment observed around the place of residence.

a<p>Class 2 was taken as reference class for Odd-Ration calculation.</p><p>NS: No significant difference, OR: Odd-Ratio, CI: 95% Confidence Interval.</p

Environmental classes determined by multiple correspondence analysis.

<p>Hierarchical ascendant classification determined 4 environmental classes presented on a dendrogram (A) and on a map (B) of controls and visceral leishmaniasis cases produced using interpolation method based on spline functions <a href="http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0001765#pntd.0001765-Wood1" target="_blank">[42]</a>.</p

Daily incidence rates (DIRs) and high-risk spatial clusters for each epidemic phase.

<p>Daily incidence rates (DIRs) and high-risk spatial clusters for each epidemic phase.</p

Main characteristics associated with the environmental classes determined by the hierarchical ascendant classification.

<p>Main characteristics associated with the environmental classes determined by the hierarchical ascendant classification.</p

Visceral leishmaniasis clusters and low risk areas in Provence-Alpes-Cote d'Azur using SatScan.

<p>Visceral leishmaniasis clusters and low risk areas in Provence-Alpes-Cote d'Azur using SatScan.</p

Evolution of Leishmania and TOSV seroprevalence in tested population according to age groups.

<p>Evolution of Leishmania and TOSV seroprevalence in tested population according to age groups.</p

Additional file 1: Table S1. of Decision criteria for MALDI-TOF MS-based identification of filamentous fungi using commercial and in-house reference databases

The species included in the in-house reference database (as labeled by the BCCM/IHEM or Marseille Mycology Laboratory staff at the time of database development). Nb str: number of strains per genus; nb sp: number of species belonging to each genus. The number in brackets represents the number of strains corresponding to each species. (DOCX 52 kb