17 research outputs found
Schematic of Intended Core Functions of the CAMERA Project
<p>CBD, Convention on Biological Diversity.</p
CAMERA Fragment Recruitment Viewer
<p>This tool graphically displays the results of a BLASTN sequence comparison of an available microbial genome against selected sequence read datasets. The example shown displays the abundance and distribution of Synechococcus spp. genome sequence in the selected sampling sites. The Synechococcus spp. genome coordinates are shown on the <i>x</i>-axis, while the <i>y</i>-axis shows the percent identity scores of the alignment to the selected Sargasso Sea and GOS sequence reads. The viewer incorporates metadata associated with the reads, allowing a user to quickly identify data of interest for further examination. The utility of the plot is to examine the biogeography and genomic variation of abundant microbes when a close reference genome exists.</p
Additional file 1: Table S1. of High-Quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym
Associated MIGS record for Mesorhizobium loti CJ3Sym. (DOC 73 kb
Additional file 2: of High-quality permanent draft genome sequence of Bradyrhizobium sp. strain WSM1743 - an effective microsymbiont of an Indigofera sp. growing in Australia
Annotation Summary, GenBank Accession Summary, Strain ID Summary, Plant Name Summary, Scientific Name Summary and Reference Search Summary. (DOC 78 kb
Additional file 1: Table S1. of High-quality permanent draft genome sequence of Bradyrhizobium sp. strain WSM1743 - an effective microsymbiont of an Indigofera sp. growing in Australia
Associated MIGS record for WSM1743. (PDF 74 kb
Additional file 1: of High-quality permanent draft genome sequence of the Bradyrhizobium elkanii type strain USDA 76T, isolated from Glycine max (L.) Merr
Associated MIGS record. Table S1. Associated MIGS record for Bradyrhizobium elkanii USDA 76T. (DOCX 19 kb
Additional file 1: Table S1. of Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of Ornithopus compressus from the Greek Island of Sifnos
Associated MIGS record. (DOC 73 kb
Additional file 2: Table S2-S4. of High-quality draft genome sequence of Ensifer meliloti Mlalz-1, a microsymbiont of Medicago laciniata (L.) miller collected in Lanzarote, Canary Islands, Spain
Table S2. Acid responsive gene orthologs present in Ensifer strains. Table S3. The nodulation genes of Ensifer meliloti Mlalz-1. Table S4. The nitrogen fixation genes of Ensifer meliloti Mlalz-1. (DOCX 65 kb
Additional file 2: Table S2. of High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
Nodulation and N2 fixation properties of Ensifer sp. PC2 on selected legume hosts. (DOCX 17 kb
Additional file 1: Table S1. of High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
Associated MIGS record for PC2 (DOCX 19 kb