Molecular authentication of green algae Caulerpa (Caulerpales, Chlorophyta) based on ITS and tufA genes from Andaman Islands, India

109-114Indigenous and non-indigenous invasive algal species introduction or prevalence is one of the major concerns to protect the native coastal environment. Globally, several studies have reported the effect of invasive alga Caulerpa on coral reefs. To establish the genetic variation between indigenous and non-indigenous invasive species, attempts have been made to develop molecular identification of Caulerpa algal species available at the Andaman Islands. In this study, 7 visually and morphologically different species belonging to the genus Caulerpa (Chlorophyta) were collected from the intertidal regions of South and Little Andaman Islands, India. The specimens were preliminarily identified based on the morphological characters and genetically mapped using ITS2 and chloroplast tufA gene markers. Six species of the Caulerpa viz. Caulerpa racemosa, C. racemosa var lamourouxii, C. racemosa var macrophysa, C. serrulata, C. fergusonii and C. microphysa were identified using ITS2 gene, and. C. mexicana var pluriseriata was identified using tufA gene. Two varieties, C. mexicana var. pluriseriata and C. racemosa var lamourouxii were found to be invasive to Indian waters. These were earlier reported in Red sea and in Phillipine waters in the pacific ocean. Further studies are needed to elucidate the genetic divergence of the Caulerpa species present in Andaman waters using different molecular markers

Baseline Survey on Coral Diseases, Stress Factors and New Threats in Coral Reefs of Gulf of Mannar Marine Biosphere, India

Gulf of Mannar Marine Biosphere Reserve (GOMMBRE) is the first marine biosphere reserve in India and Southeast Asia. It has a rich marine biodiversity including coral reefs, but now facing threats from different environmental factors and anthropogenic interferences. Particularly, coral reefs distributed in the 21 islands under the Gulf of Mannar (GoM) region are facing critical threats. Although several institutions and authors have studied various aspects on corals, direct and indirect influences of natural and anthropogenic catastrophes on corals have been poorly understood. Therefore, the main objective of this study was to identify the anthropogenic disturbances, biological stress factors and diseases on fringing reefs of GoM. The present study reveals that dead coral reefs are being replaced by assemblage of marine algae. Although several diseases were recorded during this study, pink line disease is wide spread in all the islands. Porites sp. and Acropora sp. were the more affected corals. This baseline data lays foundations to survey and to assess the rapid changes that occur over a period of time in coral reefs of GoM

Complete Genome Analysis of Undecylprodigiosin Pigment Biosynthesizing Marine Streptomyces Species Displaying Potential Bioactive Applications

Marine Streptomyces species are underexplored for their pigment molecules and genes. In this study, we report the genome of the undecylprodigiosin biosynthesizing gene cluster carrying Streptomyces sp. strain BSE6.1, displaying antioxidant, antimicrobial, and staining properties. This Gram-positive obligate aerobic bacterium was isolated from the coastal sediment of the Andaman and Nicobar Islands, India. Pink to reddish pigmented colonies with whitish powdery spores on both agar and broth media are the important morphological characteristics of this bacterium. Growth tolerance to NaCl concentrations was 2 to 7%. The assembled genome of Streptomyces sp. BSE6.1 contains one linear chromosome 8.02 Mb in length with 7157 protein-coding genes, 82 tRNAs, 3 rRNAs and at least 11 gene clusters related to the synthesis of various secondary metabolites, including undecylprodigiosin. This strain carries type I, type II, and type III polyketide synthases (PKS) genes. Type I PKS gene cluster is involved in the biosynthesis of red pigment undecylprodigiosin of BSE6.1, similar to the one found in the S. coelicolor A3(2). This red pigment was reported to have various applications in the food and pharmaceutical industries. The genome of Streptomyces sp. BSE6.1 was submitted to NCBI with a BioProject ID of PRJNA514840 (Sequence Read Archive ID: SRR10849367 and Genome accession ID: CP085300)

Ecological and Biotechnological Aspects of Pigmented Microbes: A Way Forward in Development of Food and Pharmaceutical Grade Pigments

Microbial pigments play multiple roles in the ecosystem construction, survival, and fitness of all kinds of organisms. Considerably, microbial (bacteria, fungi, yeast, and microalgae) pigments offer a wide array of food, drug, colorants, dyes, and imaging applications. In contrast to the natural pigments from microbes, synthetic colorants are widely used due to high production, high intensity, and low cost. Nevertheless, natural pigments are gaining more demand over synthetic pigments as synthetic pigments have demonstrated side effects on human health. Therefore, research on microbial pigments needs to be extended, explored, and exploited to find potential industrial applications. In this review, the evolutionary aspects, the spatial significance of important pigments, biomedical applications, research gaps, and future perspectives are detailed briefly. The pathogenic nature of some pigmented bacteria is also detailed for awareness and safe handling. In addition, pigments from macro-organisms are also discussed in some sections for comparison with microbes

Natural Substrates and Culture Conditions to Produce Pigments from Potential Microbes in Submerged Fermentation

Pigments from bacteria, fungi, yeast, cyanobacteria, and microalgae have been gaining more demand in the food, leather, and textile industries due to their natural origin and effective bioactive functions. Mass production of microbial pigments using inexpensive and ecofriendly agro-industrial residues is gaining more demand in the current research due to their low cost, natural origin, waste utilization, and high pigment stimulating characteristics. A wide range of natural substrates has been employed in submerged fermentation as carbon and nitrogen sources to enhance the pigment production from these microorganisms to obtain the required quantity of pigments. Submerged fermentation is proven to yield more pigment when added with agro-waste residues. Hence, in this review, aspects of potential pigmented microbes such as diversity, natural substrates that stimulate more pigment production from bacteria, fungi, yeast, and a few microalgae under submerged culture conditions, pigment identification, and ecological functions are detailed for the benefit of industrial personnel, researchers, and other entrepreneurs to explore pigmented microbes for multifaceted applications. In addition, some important aspects of microbial pigments are covered herein to disseminate the knowledge

Phenotypic and Molecular characterization of Epiphytic Vibrios from the marine macro algae of Andaman Islands, India.

304-309Biotic and abiotic components in the marine environment supports the growth of several surface associated microbial communities. Present study focuses on one such microbial community, the Vibrios associated to marine macro algae of Andaman Islands. A total of 48 strains comprising 10 species of Vibrios were isolated from 10 macro algal species. All the isolates were confirmed to genus level by both phenotypic and molecular characteristics, up to species level by biochemical tests. This study showed that Vibrio alginolyticus strains were frequently isolated from almost all the macro algae revealing its role as a common epiphyte. The present study signifies the abundance of Vibrios on the surface of marine macro algae which may be attributed to their ecological role in the biogeochemical cycling of nutrients and/ or controlling the surface colonization of pathogens

DNA barcoding of False stone fish <em>Scorpaenopsis diabolus </em>(Cuvier, 1829), a new record for the Andaman Islands and India

2237-2240A specimen of the false stone fish Scorpaenopsis diabolus(Cuvier, 1829)was captured at the Burmanallah coast in the Andaman Islands, India. Identification was done combining traditional taxonomy, based on the observation and measurement of morphology traits, with DNA barcoding in an integrative taxonomy approach. On this basis, S. diabolus constitutes a new record in the faunal diversity of the Andaman Islands and India

Marine Natural Products from Tunicates and Their Associated Microbes

Marine tunicates are identified as a potential source of marine natural products (MNPs), demonstrating a wide range of biological properties, like antimicrobial and anticancer activities. The symbiotic relationship between tunicates and specific microbial groups has revealed the acquisition of microbial compounds by tunicates for defensive purpose. For instance, yellow pigmented compounds, “tambjamines”, produced by the tunicate, Sigillina signifera (Sluiter, 1909), primarily originated from their bacterial symbionts, which are involved in their chemical defense function, indicating the ecological role of symbiotic microbial association with tunicates. This review has garnered comprehensive literature on MNPs produced by tunicates and their symbiotic microbionts. Various sections covered in this review include tunicates’ ecological functions, biological activities, such as antimicrobial, antitumor, and anticancer activities, metabolic origins, utilization of invasive tunicates, and research gaps. Apart from the literature content, 20 different chemical databases were explored to identify tunicates-derived MNPs. In addition, the management and exploitation of tunicate resources in the global oceans are detailed for their ecological and biotechnological implications

Multifaceted Applications of Microbial Pigments: Current Knowledge, Challenges and Future Directions for Public Health Implications

Microbial oddities such as versatile pigments are gaining more attention in current research due to their widely perceived applications as natural food colorants, textiles, antimicrobial activities, and cytotoxic activities. This indicates that the future generation will depend on microbial pigments over synthetic colorants for sustainable livelihood. Although several reviews have detailed the comprehensive applications of microbial pigments extensively, knowledge on several aspects of pigmented microbes is apparently missing and not properly reviewed anywhere. Thus, this review has been made to provide overall knowledge on biodiversity, distribution, pathogenicity, and ecological and industrial applications of microbial pigments as well as their challenges and future directions for food, industrial, and biomedical applications. Meticulously, this compendious review treatise on the pigments from bacteria, fungi, yeasts, and microalgae includes reports from the 1970s to 2018. A total of 261 pigment compounds produced by about 500 different microbial species are included, and their bioactive nature is described

Complete Genome Analysis of Undecylprodigiosin Pigment Biosynthesizing Marine <i>Streptomyces</i> Species Displaying Potential Bioactive Applications

Marine Streptomyces species are underexplored for their pigment molecules and genes. In this study, we report the genome of the undecylprodigiosin biosynthesizing gene cluster carrying Streptomyces sp. strain BSE6.1, displaying antioxidant, antimicrobial, and staining properties. This Gram-positive obligate aerobic bacterium was isolated from the coastal sediment of the Andaman and Nicobar Islands, India. Pink to reddish pigmented colonies with whitish powdery spores on both agar and broth media are the important morphological characteristics of this bacterium. Growth tolerance to NaCl concentrations was 2 to 7%. The assembled genome of Streptomyces sp. BSE6.1 contains one linear chromosome 8.02 Mb in length with 7157 protein-coding genes, 82 tRNAs, 3 rRNAs and at least 11 gene clusters related to the synthesis of various secondary metabolites, including undecylprodigiosin. This strain carries type I, type II, and type III polyketide synthases (PKS) genes. Type I PKS gene cluster is involved in the biosynthesis of red pigment undecylprodigiosin of BSE6.1, similar to the one found in the S. coelicolor A3(2). This red pigment was reported to have various applications in the food and pharmaceutical industries. The genome of Streptomyces sp. BSE6.1 was submitted to NCBI with a BioProject ID of PRJNA514840 (Sequence Read Archive ID: SRR10849367 and Genome accession ID: CP085300)