Additional file 1: of Dual RNA-seq reveals viral infections in asthmatic children without respiratory illness which are associated with changes in the airway transcriptome

Table S1. Clinical characteristics of subjects. Table S2. Gene count table for 48 RNA-seq nasal brushing subjects from GALA cohort. Table S3. Virus-High DESeq differential expression analysis. Table S4. DAVID enrichment for Virus High DEGs. Table S5. Gene count table for HRV in vitro stimulation dataset. Table S6. HRV in vitro DEGs. Table S7. Virus Low Differential Expression Analysis. Table S8. WGCNA gene2module. Table S9. DAVId for modules. Table S10. immune cell enrichments for modules. (XLS 18739 kb

Additional file 1: of Correction to: Dual RNA-seq reveals viral infections in asthmatic children without respiratory illness which are associated with changes in the airway transcriptome

Table S2. Gene count table for 48 RNA-seq nasal brushing subjects from GALA cohort. (XLSX 5732 kb

Additional file 2: Figure S1. of Dual RNA-seq reveals viral infections in asthmatic children without respiratory illness which are associated with changes in the airway transcriptome

Study design. Figure S2. Genome coverage for viruses detected in Ion Torrent Proton sequenced samples. Figure S3. Comparison of in vivo and in vitro log2 gene expression fold changes by infection status. Figure S4. WGCNA gene correlation dendrogram showing nine detected gene co-expression modules. Figure S5. H&E staining of nasal airway epithelial brushing cell cytospin from a viral-infected subject. (PDF 30208 kb