Comparing Fifty Natural Languages and Twelve Genetic Languages Using Word Embedding Language Divergence (WELD) as a Quantitative Measure of Language Distance

We introduce a new measure of distance between languages based on word embedding, called word embedding language divergence (WELD). WELD is defined as divergence between unified similarity distribution of words between languages. Using such a measure, we perform language comparison for fifty natural languages and twelve genetic languages. Our natural language dataset is a collection of sentence-aligned parallel corpora from bible translations for fifty languages spanning a variety of language families. Although we use parallel corpora, which guarantees having the same content in all languages, interestingly in many cases languages within the same family cluster together. In addition to natural languages, we perform language comparison for the coding regions in the genomes of 12 different organisms (4 plants, 6 animals, and two human subjects). Our result confirms a significant high-level difference in the genetic language model of humans/animals versus plants. The proposed method is a step toward defining a quantitative measure of similarity between languages, with applications in languages classification, genre identification, dialect identification, and evaluation of translations

A Statistical Inquiry into Gender-Based Income Inequality in Canada

Income inequality distribution between social groups has been a global challenge. The focus of this study is to investigate the potential impact of female income on family size and purchasing power. Using statistical methods such as simple linear regression, maximum likelihood analysis, and hypothesis testing, I evaluated and investigated the variability of female pre-tax income with respect to family size. The results obtained from this study illustrate that for each additional household member, the average purchasing power decreases. Additionally, the Bayesian analysis indicates that the probability for an individual with a pre-tax income of at least one and two standard deviations above the population mean is female is approximately 1/3 and 1/4, respectively, further highlighting the gender-based income inequality in Canada. This analysis concludes that although female pre-tax income has no statistically significant impact on family size, the female pre-tax income per person has a statistically significant impact on family size.Comment: 14 pages, 3 figure

On the Significance of Microtubule Flexural Behavior in Cytoskeletal Mechanics

Quantitative description of cell mechanics has challenged biological scientists for the past two decades. Various structural models have been attempted to analyze the structure of the cytoskeleton. One important aspect that has been largely ignored in all these modeling approaches is related to the flexural and buckling behavior of microtubular filaments. The objective of this paper is to explore the influence of this flexural and buckling behavior in cytoskeletal mechanics

Reproductive biology of hilsa shad (Tenualosa ilisha) in coastal waters of the northwest of Persian Gulf

Some aspects of the reproductive biology of Hilsa Shad, Tenualosa ilisha from the Persian Gulf and rivers of Khouzestan Province of Iran were analyzed. A total of 485 fish were sampled by gillnet from landing center of Arvand (AR) and Bahmanshir (BR) rivers during period of April 2010 to September 2010. Reproductive characteristic of T. ilisha showed that sex ratio is M:F=1:2, in PG, AR and BR. This means that females predominate than males. Monthly variations in Gonadosomatic Index (GSI) of both sexes were quite apparent. In PG, maximum values were recorded in April for male and female. In AR and BR, maximum values were recorded in June and May for male and female, respectively. Changes in GSI indices are considered as a proof that maturation season in AR and BR is started from March and spawning is started from April to July in AR and BR is started from March to August. The Length - Weight relationship was measured for PG as W= 1.459L^2.687, AR and BR as W=2.189L^3.166 and W=1.840L^2.937, respectively

Biophysical Coarse-Grained Modeling Provides Insights into Transport through the Nuclear Pore Complex

AbstractThe nuclear pore complex (NPC) is the gatekeeper of the nucleus, capable of actively discriminating between the active and inert cargo while accommodating a high rate of translocations. The biophysical mechanisms underlying transport, however, remain unclear due to the lack of information about biophysical factors playing role in transport. Based on published experimental data, we have established a coarse-grained model of an intact NPC structure to examine nucleocytoplasmic transport with refined spatial and temporal resolutions. Using our model, we estimate the transport time versus cargo sizes. Our findings suggest that the mean transport time of cargos smaller than 15 nm is independent of size, while beyond this size, there is a sharp increase in the mean transport time. The model confirms that kap-FG hydrophobicity is sufficient for active cargo transport. Moreover, our model predicts that during translocation, small and large cargo-complexes are hydrophobically attached to FG-repeat domains for 86 and 96% of their transport time, respectively. Inside the central channel FG-repeats form a thick layer on the wall leaving an open tube. The cargo-complex is almost always attached to this layer and diffuses back and forth, regardless of the cargo size. Finally, we propose a plausible model for transport in which the NPC can be viewed as a lubricated gate. This model incorporates basic assumptions underlying virtual-gate and reduction-of-dimensionality models with the addition of the FG-layer inside the central channel acting as a lubricant

Beyond the Hype: Assessing the Performance, Trustworthiness, and Clinical Suitability of GPT3.5

The use of large language models (LLMs) in healthcare is gaining popularity, but their practicality and safety in clinical settings have not been thoroughly assessed. In high-stakes environments like medical settings, trust and safety are critical issues for LLMs. To address these concerns, we present an approach to evaluate the performance and trustworthiness of a GPT3.5 model for medical image protocol assignment. We compare it with a fine-tuned BERT model and a radiologist. In addition, we have a radiologist review the GPT3.5 output to evaluate its decision-making process. Our evaluation dataset consists of 4,700 physician entries across 11 imaging protocol classes spanning the entire head. Our findings suggest that the GPT3.5 performance falls behind BERT and a radiologist. However, GPT3.5 outperforms BERT in its ability to explain its decision, detect relevant word indicators, and model calibration. Furthermore, by analyzing the explanations of GPT3.5 for misclassifications, we reveal systematic errors that need to be resolved to enhance its safety and suitability for clinical use

The embryonic development and formation of Bunnei (Barbus sharpeyi Gunther, 1874)

Understanding the embryogenesis of Bunni is a useful tool for finding the time and suitable environmental conditions for spawning, growth requirements and use of techniques to increase the growth rate and survival. The stages of embryonic development for Bunnei (Barbus sharpeyi) was investigated in 22°C. The reared brood stocks were spawned in captivity condition. The oocytes were spherical, brown and very adhesive. The cleavage was fast and the first division was recorded within 15-20 minutes after fertilization. The blastulation and gastrulation were investigated in 7:40 and 13:10 hours after fertilization with the yolk sac diameter of 1.18±0.061mm (Mean±SD), respectively. The organogenesis was started 21 hours after the fertilization, when the blastopore was closed and notochord was formed. The embryonic stages were continued by appearance the brain, the somites and the melanophores on the yolk sac. The heart was beaten and shown the blood circulation 65 hours after the fertilization. The head, tail and pectoral fins were moved frequently. The embryo reached to pre hatching and final hatching 79:10 and 84:10 hours after fertilization, respectively, and the embryo existed from corion with the length of about 5.29±0/121mm (Mean±SD)

Band-like Stress Fiber Propagation in a Continuum and Implications for Myosin Contractile Stresses

Stress fibers are band-like features that form with sarcomere-like actin and myosin arrangement between cell regions, resisting myosin contractility. We consider three aspects of stress fiber formation: (1) they form by cytoskeletal actin–myosin interaction when myosin contractile forces are resisted, (2) they propagate in a band-like manner, and (3) they maintain a level of stress and material continuity with the cytoskeleton. This suggests that any description of myosin force should capture the band-like propagation of stress fibers within the constraints of a continuum model. Recent studies describe myosin force as increasing proportional to the cytoskeletal resistance in that direction, but do not capture the band-like propagation of myosin stresses in a continuum. While the spreading of myosin stresses in continuum models is commonly attributed to the elliptic nature of continuum equations, we show that it comes from an incomplete description of the myosin force. Qualitative observations of cytoskeletal actin–myosin interaction indicate the interaction to be ‘zipper-like’; myosin contractile forces get transmitted by bending actin filaments in directions away from that of the cytoskeletal resistance. A simple coarse-grained implementation of the lateral myosin forces that arise from the zippering action reproduces band-like stress propagation within a continuum model for the first time. This model also shows actin packing into the stress channel and its propagation along the edge for square and triangular constrained cells; features not captured earlier. Physically, the lateral contractile forces prevent stress spreading by balancing perpendicular shear forces that arise when stress channels through a continuum. Mathematically, these forces render the continuum stress equation hyperbolic. This paper presents a theoretical argument, based on continuum mechanics principles, that it is the zippering actin–myosin action that allows for band-like stress fiber propagation within a coarse-grained cytoskeletal continuum, and that any visualization of the cytoskeletal stress field should account for lateral contractile forces accompanying the much-acknowledged contractile force along a stress fiber

Talin is required to increase stiffness of focal molecular complex in its early formation process

For cellular adaptation in mechanical environments, it is important to consider transmission of forces from the outside to the inside of cells via a focal molecular complex. The focal molecular complex, which consists of integrin, talin, vinculin and actin, is known to form in response to a force applied via the extra-cellular matrix (ECM). In the early formation process of the complex, the complex–actin connection is reinforced. These structural changes of the nascent complex result in an increase in its mechanical integrity and overall stiffness, possibly leading to the maturation of the nascent complex by enhancing force transmission. In this study, we hypothesized that the complex component talin is a crucial factor in increasing the stiffness of the nascent complex. To test the hypothesis, we used atomic force microscopy (AFM) to measure the stiffness of the nascent complex using a probe coated with fibronectin. Stiffness measurements were conducted for intact and talin knocked-down cells. Our results demonstrated that talin was required to increase the stiffness of the nascent complex, which could be caused by the reinforced connection between the complex and actin filaments mediated by talin