Identification of ejaculated proteins in the house mouse (Mus domesticus) via isotopic labeling

<p>Abstract</p> <p>Background</p> <p>Seminal fluid plays an important role in successful fertilization, but knowledge of the full suite of proteins transferred from males to females during copulation is incomplete. The list of ejaculated proteins remains particularly scant in one of the best-studied mammalian systems, the house mouse (<it>Mus domesticus</it>), where artificial ejaculation techniques have proven inadequate. Here we investigate an alternative method for identifying ejaculated proteins, by isotopically labeling females with ¹⁵N and then mating them to unlabeled, vasectomized males. Proteins were then isolated from mated females and identified using mass spectrometry. In addition to gaining insights into possible functions and fates of ejaculated proteins, our study serves as proof of concept that isotopic labeling is a powerful means to study reproductive proteins.</p> <p>Results</p> <p>We identified 69 male-derived proteins from the female reproductive tract following copulation. More than a third of all spectra detected mapped to just seven genes known to be structurally important in the formation of the copulatory plug, a hard coagulum that forms shortly after mating. Seminal fluid is significantly enriched for proteins that function in protection from oxidative stress and endopeptidase inhibition. Females, on the other hand, produce endopeptidases in response to mating. The 69 ejaculated proteins evolve significantly more rapidly than other proteins that we previously identified directly from dissection of the male reproductive tract.</p> <p>Conclusion</p> <p>Our study attempts to comprehensively identify the proteins transferred from males to females during mating, expanding the application of isotopic labeling to mammalian reproductive genomics. This technique opens the way to the targeted monitoring of the fate of ejaculated proteins as they incubate in the female reproductive tract.</p

Seasonal Fluctuations of Astrovirus, But Not Coronavirus Shedding in Bats Inhabiting Human-Modified Tropical Forests

Emerging infectious diseases (EIDs) are considered a major threat to global health. Most EIDs appear to result from increased contact between wildlife and humans, especially when humans encroach into formerly pristine habitats. Habitat deterioration may also negatively affect the physiology and health of wildlife species, which may eventually lead to a higher susceptibility to infectious agents and/or increased shedding of the pathogens causing EIDs. Bats are known to host viruses closely related to important EIDs. Here, we tested in a paleotropical forest with ongoing logging and fragmentation, whether habitat disturbance influences the occurrence of astro- and coronaviruses in eight bat species. In contrast to our hypothesis, anthropogenic habitat disturbance was not associated with corona- and astrovirus detection rates in fecal samples. However, we found that bats infected with either astro- or coronaviruses were likely to be coinfected with the respective other virus. Additionally, we identified two more risk factors influencing astrovirus shedding. First, the detection rate of astroviruses was higher at the beginning of the rainy compared to the dry season. Second, there was a trend that individuals with a poor body condition had a higher probability of shedding astroviruses in their feces. The identification of risk factors for increased viral shedding that may potentially result in increased interspecies transmission is important to prevent viral spillovers from bats to other animals, including humans

Hypogene Speleogenesis in the Guadalupe Mountains, New Mexico and Texas, USA

The Guadalupe Mountains consist of an uplift of Permian carbonate shelf deposits in a semiarid landscape. A variety of speleogenetic processes, mostly hypogene, have made them one of the world’s best-known cave regions. The most notable caves are Carlsbad Cavern, which contains the largest known cave room in the USA, and Lechuguilla Cave, now the world’s 7th longest. Because the caves are no longer active, there was early confusion about their origin. This was resolved when long-dormant sulfuric acid processes were recognized, with H2S supplied by nearby oil fields. Potassium-argon dating of the by-product mineral alunite in the Guadalupes indicates speleogenetic ages from 12 to 4 million years, decreasing with lower elevation. Caves show abundant evidence for subaerial corrosion, both by sulfuric acid and carbonic acid in water films. Many seemingly phreatic features have resulted from this subaerial process. Microbial alteration of bedrock has contributed to weathering. There is evidence that isolated caves of greater age, lined by large scalenohedral calcite, were formed by supercritical CO2 in deep thermal water

Wavelet-based Fuzzy Clustering of Time Series

Stationary and non stationary time series, Switching time series, Wavelet variance, Crisp clustering, Fuzzy clustering, Developed and emerging markets,