Additional file 1: of Is Bulpa criteria suitable for the diagnosis of probable invasive pulmonary Aspergillosis in critically ill patients with chronic obstructive pulmonary disease? A comparative study with EORTC/ MSG and ICU criteria

“Three Key Factors” of the Included Patients. Note: The history of steroid use, abnormal radiology and mycological findings of the included 59 COPD patients were listed in Additional file 1, and patients were diagnosed as probable IPA using three criteria respectively. “Y” means that the case was could be diagnosed as probable/ putative IPA according to the criteria; “N” means that the case was could not be diagnosed as probable/ putative IPA according to the criteria. (DOCX 128 kb

The Citizen Forester (2016-06)

Figure S6. The summary scatterplot of the top 20 dysregulated pathways of target genes in the comparisons of each pair. (PDF 238 kb

Additional file 6: of Landscape of transcription and long non-coding RNAs reveals new insights into the inflammatory and fibrotic response following ventilator-induced lung injury

Table S3. The entire list of significant dysregulated GO terms of DE mRNAs in the comparisons of each pair. (XLSX 1870 kb

Additional file 14: of Landscape of transcription and long non-coding RNAs reveals new insights into the inflammatory and fibrotic response following ventilator-induced lung injury

Figure S7. LncRNA-mRNA regulatory network of the VILI group compared to the sham group on day 7. (PDF 547 kb

Additional file 11: of Landscape of transcription and long non-coding RNAs reveals new insights into the inflammatory and fibrotic response following ventilator-induced lung injury

Table S6. The entire list of significant dysregulated GO terms of target genes in the comparisons of each pair. (XLSX 2312 kb

Additional file 12: of Landscape of transcription and long non-coding RNAs reveals new insights into the inflammatory and fibrotic response following ventilator-induced lung injury

Figure S6. The summary scatterplot of the top 20 dysregulated pathways of target genes in the comparisons of each pair. (PDF 238 kb

Additional file 9: of Landscape of transcription and long non-coding RNAs reveals new insights into the inflammatory and fibrotic response following ventilator-induced lung injury

Table S5. The entire list of DE lncRNAs in the comparisons of each pair. (XLSX 100 kb

Additional file 8: of Landscape of transcription and long non-coding RNAs reveals new insights into the inflammatory and fibrotic response following ventilator-induced lung injury

Table S4. The entire list of dysregulated functional pathways of DE mRNAs in the comparisons of each pair. (XLSX 94 kb

Additional file 1: of Landscape of transcription and long non-coding RNAs reveals new insights into the inflammatory and fibrotic response following ventilator-induced lung injury

Figure S1. Primers designed for qPCR validation. (PDF 166 kb

Additional file 7: of Landscape of transcription and long non-coding RNAs reveals new insights into the inflammatory and fibrotic response following ventilator-induced lung injury

Figure S4. The summary scatterplot of the top 20 dysregulated pathways of DE mRNAs in the comparisons of each pair. (PDF 239 kb