Construction of breed-specific raw SNP-db of bovine liver transcriptome.

<p>Construction of breed-specific raw SNP-db of bovine liver transcriptome.</p

Venn diagram showing the number of SNPs segregating in Polish Red, Polish HF and Hereford cattle breeds

<p>Venn diagram showing the number of SNPs segregating in Polish Red, Polish HF and Hereford cattle breeds</p

SNP mutations and primer sequences of selected SNPs originating from the bovine liver RNA-seq experiment.

<p>SNP mutations and primer sequences of selected SNPs originating from the bovine liver RNA-seq experiment.</p

KASP^TM SNP genotyping assay of BTA4_32078842 locus of Polish HF <i>IGF2BP3</i> gene showing the data for single KASP^TM assays on a single cluster plot.

<p>KASP^TM SNP genotyping assay of BTA4_32078842 locus of Polish HF <i>IGF2BP3</i> gene showing the data for single KASP^TM assays on a single cluster plot.</p

The phylogenetic relationship among RNA-seq samples of bovine liver using Maximum likelihood method based on the JTT matrix-based model.

<p>An unrooted phylogeny tree of 18 bulls’ samples representing developmental ages 6 months (6A, 6B), 9 months (9A, 9B), and 12 months (12A, 12B) of Polish Red, Polish-HF and Hereford breeds. The percentage of trees in which the associated taxa clustered together is shown next to the branches. All nodes were robust at 100% bootstrap support. The scale bar denotes substitutions per site.</p

Transcriptome mapping profile of liver tissue from the Polish Red cattle breed aligned to bovine reference UMD3.1 genome assembly.

<p>Transcriptome mapping profile of liver tissue from the Polish Red cattle breed aligned to bovine reference UMD3.1 genome assembly.</p

Description of submitted FASTQ sequences of bovine liver of all 18 young bulls from three cattle breeds using RNA-seq.

<p>Description of submitted FASTQ sequences of bovine liver of all 18 young bulls from three cattle breeds using RNA-seq.</p

The distribution (n) of investigating young bulls in a breed-specific experimental design representing bovine liver transcriptome.

<p>The distribution (n) of investigating young bulls in a breed-specific experimental design representing bovine liver transcriptome.</p

KASP^TM SNP genotyping assay of BTA10_7576693 locus of Hereford <i>IQGAP2</i> gene showing the data for single KASP^TM assays on a single cluster plot.

<p>KASP^TM SNP genotyping assay of BTA10_7576693 locus of Hereford <i>IQGAP2</i> gene showing the data for single KASP^TM assays on a single cluster plot.</p

KASP^TM SNP genotyping assay of BTA20_31894358 locus of Hereford <i>GHR</i> gene showing the data for single KASP^TM assays on a single cluster plot.

<p>KASP^TM SNP genotyping assay of BTA20_31894358 locus of Hereford <i>GHR</i> gene showing the data for single KASP^TM assays on a single cluster plot.</p