Mitochondrial Transfer RNA Genes in a Black Fly, \u3ci\u3eSimulium vittatum\u3c/i\u3e (Diptera: Simuliidae), Indicate Long Divergence from Mosquito (Diptera: Culicidae) and Fruit Fly (Diptera: Drosophilidae)

Sequences are given for nine complete genes and one partial mitochondrial tRNA gene of the black fly, Simulium vittatum (Zetterstedt). Sequenced tRNA genes were for alanine, arginine, asparagine, aspartic acid, glutamic acid, glycine, leucine(CUN), lysine, serine(AGN), and valine. Nucleotides were aligned with the same previously sequenced genes in Aedes albopictus Skuse and Drosophila yakuba Burla. A cluster of six tRNA genes, which differ in arrangement in Ae. albopictus and D. yakuba, was amplified by PCR and found to have the same position and orientation in S. vittatum as in D. yakuba. Overall, similarity with either D. yakuba or Ae. albopictus was 86%. Sequences that were common to the three insects suggest that black flies and mosquitoes are as divergent from each other as either is from Drosophila. Sequences for nine species of black flies were obtained for tRNA leucine(CUN) from DNA amplified with another primer set. Little variation occurred within the tRNA gene but, by including the flanking regions to provide 175 base pairs, a phylogeny of the nine species was obtained that was largely consistent with current classification

Determination of Strong-Interaction Widths and Shifts of Pionic X-Rays with a Crystal Spectrometer

Pionic 3d-2p atomic transitions in F, Na, and Mg have been studied using a bent crystal spectrometer. The pionic atoms were formed in the production target placed in the external proton beam of the Space Radiation Effects Laboratory synchrocyclotron. The observed energies and widths of the transitions are E=41679(3) eV and Γ=21(8) eV, E=62434(18) eV and Γ=22(80) eV, E=74389(9) eV and Γ=67(35) eV, in F, Na, and Mg, respectively. The results are compared with calculations based on a pion-nucleus optical potential

Molecular Differentiation of Alfalfa Weevil Strains (Coleoptera: Curculionidae)

Mitochondrial DNA was amplified and sequenced from eastern, western, and Egyptian strains of alfalfa weevil, Hypera postica (Gyllenhal). Eastern and Egyptian weevils differed at only 2 nucleotide sites in 1,031 base pairs sequenced; western weevils differed by 5% sequence divergence. Three restriction sites were identified which separated eastern and western haplotypes. No intrastrain polymorphism was detected in 150 weevils from Nebraska. Collections from Lincoln in eastern Nebraska and Scottsbluff in western Nebraska were fixed for the eastern and western haplotypes, respectively. Eastern and western haplotypes were found together in the same fields in a broad overlap region in central Nebraska

Estimating Exploitation Rates in the Alabama Red Snapper Fishery Using a High-Reward Tag–Recapture Approach

Accurate estimates of exploitation are essential to managing an exploited fishery. However, these estimates are often dependent on the area and vulnerable sizes of fish considered in a study. High-reward tagging studies offer a simple and direct approach to estimating exploitation rates at these various scales and in examining how model parameters impact exploitation rate estimates. These methods can ultimately provide a better understanding of the spatial dynamics of exploitation at smaller local and regional scales within a fishery—a measure often needed for more site-attached species, such as the Red Snapper Lutjanus campechanus. We used this approach to tag 724 Red Snapper during 2016 in the Alabama Artificial Reef Zone within the northern Gulf of Mexico to estimate recreational exploitation rates in Alabama waters. We fitted a series of tag return models, analyzed using maximum likelihood, to examine how release depth, movement between depth strata, fish length, and the rate at which anglers released fish impacted estimates of exploitation rate under a range of assumed natural and tagging mortality rates. Our model results suggested higher fishing mortality in the shallower depth stratum than in the deep stratum, constant movement rates with release depth, and constant release rates across fish lengths. Exploitation rate for the aggregate tagged population across the entire sample area was estimated at 0.14. Exploitation rates estimated for each depth stratum were 0.20 (shallow stratum

Effects of Preservation Methods, Parasites, and Gut Contents of Black Flies (Diptera: Simuliidae) on Polymerase Chain Reaction Products

Molecular analysis of biological specimens usually requires extraction of high-molecular-weight DNA free of foreign DNA contaminants. DNA was extracted from black flies at different life stages that had been preserved by 4 methods: larvae and adults in ethanol, larvae in Carnoy’s solution, adults on card-points, and adults hand-swatted and sun-dried. Using specific primers for the mitochondrial ND4 gene, a 257-bp amplicon was obtained from specimens preserved by ethanol, card-point mounting, and sun-drying. Successful amplification often required DNA dilutions ≥ 1:20 (\u3c1–10 ng). DNA from specimens preserved in Carnoy’s solution (ethanol: acetic acid, 3:1) yielded degraded DNA, resulting in fewer successful amplifications. Parasitic nematodes and, to a lesser extent, gut contents resulted in extra products when amplified with randomly amplified polymorphic DNA (RAPD) primers. Sufficient DNA was extracted from the head of a larva for a successful polymerase chain reaction (PCR), eliminating the need to remove the contaminating gut and parasites

Beating patterns of filaments in viscoelastic fluids

Many swimming microorganisms, such as bacteria and sperm, use flexible flagella to move through viscoelastic media in their natural environments. In this paper we address the effects a viscoelastic fluid has on the motion and beating patterns of elastic filaments. We treat both a passive filament which is actuated at one end, and an active filament with bending forces arising from internal motors distributed along its length. We describe how viscoelasticity modifies the hydrodynamic forces exerted on the filaments, and how these modified forces affect the beating patterns. We show how high viscosity of purely viscous or viscoelastic solutions can lead to the experimentally observed beating patterns of sperm flagella, in which motion is concentrated at the distal end of the flagella

U. S. position paper on sodium fires, design and testing

Sodium combustion phenomena and U.S. computer codes developed for sodium fires are discussed. Ways of preventing and mitigating sodium fires are described. Effects of sodium fires and spills on LMFBR structural materials, thermal insulation materials, and equipment/instrumentation are considered. (DLC

Tiger Sharks Eat Songbirds: Reply

In response to our recent paper (Drymon et al. 2019), Yosef (2019) questions the mechanism proposed to explain interactions between tiger sharks (Galeocerdo cuvier) and migratory songbirds, while offering an alternative mechanism based on a single observation. We appreciate the comments from Yosef and the opportunity to respond