21 research outputs found
Impact Craters as Habitats for Life: Endolithic Colonization of Shocked Gneiss from the Haughton Impact Structure, Devon Island, Canada
Meteorite impacts are ubiquitous throughout our solar system and are a fundamental geological process on rocky and icy planetary bodies. Though initially detrimental to biology, an impact event can favourably change the availability and habitability of a substrate for endolithic organisms, which are then able to (re)colonize micro-fractures and pore spaces created during the impact. The colonization of rocks by endolithic communities is an advantageous trait, especially in environments such as hot or cold deserts, where temperature shifts, low water availability and high UV indices pose a significant problem. On Mars, similar conditions – albeit, more extreme – prevail. In these instances, impact structures could provide refuge to endolithic organisms. Previous work has shown the increase of microbial biomass with shock level in sedimentary rocks, related to increases in porosity. However, sedimentary rocks experience a collapse of pore spaces at pressures over ~35 GPa and, thus, do not support endolithic colonization at pressures higher than this. In contrast, the porosity of crystalline rocks such as gneisses increases proportionally until vapourization. This study considers shocked gneisses from the 39 Ma, 23 km diameter Haughton impact structure, Devon Island, Canada, and investigates the relationship between shock metamorphism and microbial colonization. Utilizing a variety of microscopy techniques, the subsurface community was visualized and the biomass levels calculated with increasing shock metamorphism. Average cell abundance was found to increase with shock level, with a maximum of 108 cells/g. It was found that microbial biomass did increase with increasing porosity, and was not affected by reductions in trace element concentrations of the rock, likely being more dependent on exogenous nutrients within meteoric waters or supplied aerially. It can be concluded that crystalline substrates can become habitats for endolithic organisms through the process of impact metamorphism, providing an excellent refuge in extreme environments. On Mars where the substrate is largely basaltic, it is suggested that impact craters would be an excellent target for life detection due to extensive deposits of shocked basalt. These more mafic rocks, coupled with the presence of hydrothermal activity, would have potentially provided significant colonization potential on early Mars and may continue to provide refuge today
Microbial Diversity in a Hypersaline Sulfate Lake: A Terrestrial Analog of Ancient Mars
Life can persist under severe osmotic stress and low water activity in hypersaline environments. On Mars, evidence for the past presence of saline bodies of water is prevalent and resulted in the widespread deposition of sulfate and chloride salts. Here we investigate Spotted Lake (British Columbia, Canada), a hypersaline lake with extreme (>3 M) levels of sulfate salts as an exemplar of the conditions thought to be associated with ancient Mars. We provide the first characterization of microbial structure in Spotted Lake sediments through metagenomic sequencing, and report a bacteria-dominated community with abundant Proteobacteria, Firmicutes, and Bacteroidetes, as well as diverse extremophiles. Microbial abundance and functional comparisons reveal similarities to Ace Lake, a meromictic Antarctic lake with anoxic and sulfidic bottom waters. Our analysis suggests that hypersaline-associated species occupy niches characterized foremost by differential abundance of Archaea, uncharacterized Bacteria, and Cyanobacteria. Potential biosignatures in this environment are discussed, specifically the likelihood of a strong sulfur isotopic fractionation record within the sediments due to the presence of sulfate reducing bacteria. With its high sulfate levels and seasonal freeze-thaw cycles, Spotted Lake is an analog for ancient paleolakes on Mars in which sulfate salt deposits may have offered periodically habitable environments, and could have concentrated and preserved organic materials or their biomarkers over geologic time
High-priority and low-priority drug-drug interactions in different international Electronic Health Record systems::a comparative study
Field and laboratory validation of remote rover operations Science Team findings: The CanMars Mars Sample Return analogue mission
The CanMars Mars Sample Return Analogue Deployment (MSRAD) was a closely simulated, end-to-end Mars Sample Return (MSR) mission scenario, with instrumentation, goals, and constraints modeled on the upcoming NASA Mars 2020 rover mission; this paper reports on the post-mission validation of the exercise. The exercise utilized the CSA Mars Exploration Science Rover (MESR) rover, deployed to Utah, USA, at a Mars-analogue field site. The principal features of the field site located near Green River, Utah are Late Jurassic inverted, fluvial paleochannels, analogous to features on Mars in sites being considered for the ESA ExoMars rover mission and present within the chosen landing site for the Mars 2020 rover mission. The in-simulation (“in-sim”) mission operations team worked remotely from The University of Western Ontario, Canada. A suite of MESR-integrated and hand-held spectrometers was selected to mimic those of the Mars 2020 payload, and a Utah-based, on-site team was tasked with field operations to carry out the data collection and sampling as commanded by the in-sim team. As a validation of the in-sim mission science findings, the field team performed an independent geological assessment. This paper documents the field team's on-site geological assessment and subsequent laboratory and analytical results, then offers a comparison of mission (in-sim) and post-mission (laboratory) science results. The laboratory-based findings were largely consistent with the in-sim rover-derived data and geological interpretations, though some notable exceptions highlight the inherent difficulties in remote science. In some cases, available data was insufficient for lithologic identification given the absence of other important contextual information (e.g., textural information). This study suggests that the in-sim instruments were largely adequate for the Science Team to characterize samples; however, rover-based field work is necessarily hampered by mobility and time constraints with an obvious effect on efficiency but also precision, and to some extent, accuracy of the findings. The data show a dearth of preserved total organic carbon (TOC) – used as a proxy for ancient biosignature preservation potential – in the fluvial-lacustrine system of this field site, suggesting serious consideration with respect to the capabilities and opportunities for addressing the Mars exploration goals. We therefore suggest a thorough characterization of terrestrial sites analogous to those of Mars rover landing sites, and in-depth field studies like CanMars as important, pre-mission strategic exercises
Field and laboratory validation of remote rover operations Science Team findings: The CanMars Mars Sample Return analogue mission
The CanMars Mars Sample Return Analogue Deployment (MSRAD) was a closely simulated, end-to-end Mars Sample Return (MSR) mission scenario, with instrumentation, goals, and constraints modeled on the upcoming NASA Mars 2020 rover mission; this paper reports on the post-mission validation of the exercise. The exercise utilized the CSA Mars Exploration Science Rover (MESR) rover, deployed to Utah, USA, at a Mars-analogue field site. The principal features of the field site located near Green River, Utah are Late Jurassic inverted, fluvial paleochannels, analogous to features on Mars in sites being considered for the ESA ExoMars rover mission and present within the chosen landing site for the Mars 2020 rover mission. The in-simulation (“in-sim”) mission operations team worked remotely from The University of Western Ontario, Canada. A suite of MESR-integrated and hand-held spectrometers was selected to mimic those of the Mars 2020 payload, and a Utah-based, on-site team was tasked with field operations to carry out the data collection and sampling as commanded by the in-sim team. As a validation of the in-sim mission science findings, the field team performed an independent geological assessment. This paper documents the field team's on-site geological assessment and subsequent laboratory and analytical results, then offers a comparison of mission (in-sim) and post-mission (laboratory) science results. The laboratory-based findings were largely consistent with the in-sim rover-derived data and geological interpretations, though some notable exceptions highlight the inherent difficulties in remote science. In some cases, available data was insufficient for lithologic identification given the absence of other important contextual information (e.g., textural information). This study suggests that the in-sim instruments were largely adequate for the Science Team to characterize samples; however, rover-based field work is necessarily hampered by mobility and time constraints with an obvious effect on efficiency but also precision, and to some extent, accuracy of the findings. The data show a dearth of preserved total organic carbon (TOC) – used as a proxy for ancient biosignature preservation potential – in the fluvial-lacustrine system of this field site, suggesting serious consideration with respect to the capabilities and opportunities for addressing the Mars exploration goals. We therefore suggest a thorough characterization of terrestrial sites analogous to those of Mars rover landing sites, and in-depth field studies like CanMars as important, pre-mission strategic exercises
Sequencing nothing: Exploring failure modes of nanopore sensing and implications for life detection
The detection of extant life is a major focus of many planned future planetary missions, a current challenge of which is the ability to target biomarkers capable of providing unambiguous evidence of life. DNA sequencing is increasingly recognized as a powerful tool for life detection for planetary exploration missions; beyond use of sequence information to determine the origins of the sample (e.g., extant life or forward contamination), recent advances in the field have enabled interrogation of single molecules, with or without amplification. The focus of this work is on failure modes, specifically the issues encountered when there is no-to-low input DNA into a sequencing device, and the potential for the generation of sequencing artifacts that could be interpreted as a false positive. Using Oxford Nanopore Technologies (ONT) MinION, we assess whether single molecule sequencing, involving no amplification, generates noise signals that could be misinterpreted in the context of a planetary exploration mission, and also whether the ability of the instrument to handle these types of situations could make it feasible for clean room monitoring. Utilizing quality score filtering techniques in place at the time of this experiment, runs containing only initial flowcell chemistry and/or library reagents generated 5 passing reads out of a total of 3568 measured reads, and contained estimated sequences with low complexity that did not map to the NCBI database. The noise characteristics in all instances suggest that quality thresholds were appropriately chosen by ONT: new chemistry and basecalling workflows have shown further suppression of noise sources, which completely mitigate the generation of spurious reads. Keywords: Nanopore sequencing; Life detection; Planetary protection; Nucleic acidsUnited States. National Aeronautics and Space Administration (Grant NNX15AF85G
Microbial Life in Impact Craters
Asteroid and comet impacts are known to have caused profound disruption to multicellular life, yet their influence on habitats for microorganisms, which comprise the majority of Earth's biomass, is less well understood. Of particular interest are geological changes in the target lithology at and near the point of impact that can persist for billions of years. Deep subsurface and surface-dwelling microorganisms are shown to gain advantages from impact-induced fracturing of rocks. Deleterious changes are associated with impact-induced closure of pore spaces in rocks. Superimposed on these long-term geological changes are post-impact alterations such as changes in the hydrological system in and around a crater. The close coupling between geological changes and the conditions for microorganisms yields a synthesis of the fields of microbiology and impact cratering. We use these data to discuss how craters can be used in the search for life beyond Earth
The effects of meteorite impacts on the availability of bioessential elements for endolithic organisms
Meteorite impacts, one of the most ubiquitous processes in the solar system, have the ability to destroy as well as create habitats for life. The impact process can increase the translucency and porosity of the target substrate, as well as mobilize biologically relevant elements within the substrate. For endolithic organisms, this process has important implications, especially in extreme environments where they are forced to seek refuge in the interior of rocks. Here, we show that unshocked target rocks and rocks that have experienced pressures up to about 80 GPa from the Haughton impact structure, Devon Island, Canada, possess a small, but discernible change in bulk chemistry within the major oxide analysis. However, changes in the distribution of elements did occur with increasing shock level for both the sedimentary and crystalline target. Both the crystalline and sedimentary target rocks contain significant amounts of glasses at higher shock levels (up to about 95% by volume), which would improve the availability of these elements to potential microbial endoliths as glasses are more easily dissolved by organic acids. The implication that impact events do not impoverish their capacity to serve as a “substrate” through volatilization is important with respect to analogous impact structures on Mars. After the deleterious effects of the direct meteorite impact, any microorganisms on Mars would have benefited from the input of heat, the mobilization of a possible frozen groundwater system, as well as increased translucency, porosity, and trace nutrient availability of the target substrate
Impact-generated endolithic habitat within crystalline rocks of the haughton impact structure, Devon Island, Canada
The colonization of rocks by endolithic communities is an advantageous trait, especially in environments such as hot or cold deserts, where large temperature ranges, low water availability, and high-intensity ultraviolet radiation pose a significant challenge to survival and growth. On Mars, similar conditions (albeit more extreme) prevail. In these environments, meteorite impact structures could provide refuge for endolithic organisms. Though initially detrimental to biology, an impact event into a rocky body can favorably change the availability and habitability of a substrate for endolithic organisms, which are then able to (re)colonize microfractures and pore spaces created during the impact. Here, we show how shocked gneisses from the Haughton impact structure, Devon Island, Canada, offer significant refuge for endolithic communities. A total of 28 gneiss samples representing a range of shock states were analyzed, collected from in situ, stable field locations. For each sample, the top centimeter of rock was examined with confocal scanning laser microscopy, scanning electron microscopy, and bright-field microscopy to investigate the relationship of biomass with shock level, which was found to correlate generally with increased shock state and particularly with increased porosity. We found that gneisses, which experienced pressures between 35 and 60 GPa, provide the most ideal habitat for endolithic organisms
Microbial Diversity in a Hypersaline Sulfate Lake: A Terrestrial Analog of Ancient Mars
Life can persist under severe osmotic stress and low water activity in hypersaline environments. On Mars, evidence for the past presence of saline bodies of water is prevalent and resulted in the widespread deposition of sulfate and chloride salts. Here we investigate Spotted Lake (British Columbia, Canada), a hypersaline lake with extreme (>3 M) levels of sulfate salts as an exemplar of the conditions thought to be associated with ancient Mars. We provide the first characterization of microbial structure in Spotted Lake sediments through metagenomic sequencing, and report a bacteria-dominated community with abundant Proteobacteria, Firmicutes, and Bacteroidetes, as well as diverse extremophiles. Microbial abundance and functional comparisons reveal similarities to Ace Lake, a meromictic Antarctic lake with anoxic and sulfidic bottom waters. Our analysis suggests that hypersaline-associated species occupy niches characterized foremost by differential abundance of Archaea, uncharacterized Bacteria, and Cyanobacteria. Potential biosignatures in this environment are discussed, specifically the likelihood of a strong sulfur isotopic fractionation record within the sediments due to the presence of sulfate reducing bacteria. With its high sulfate levels and seasonal freeze-thaw cycles, Spotted Lake is an analog for ancient paleolakes on Mars in which sulfate salt deposits may have offered periodically habitable environments, and could have concentrated and preserved organic materials or their biomarkers over geologic time