The complete functional characterisation of the terpene synthase family in tomato

Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/154908/1/nph16431-sup-0001-SupInfo.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/154908/2/nph16431.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/154908/3/nph16431_am.pd

Harnessing plant trichome biochemistry for the production of useful compounds

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/71403/1/j.1365-313X.2008.03432.x.pd

Identification of the polypeptides of the major light-harvesting complex of photosystem II (LHCII) with their genes in tomato

Using an improved SDS-PAGE system, the polypeptides of the major chlorophyll a/b light-harvesting complex of PSII (LHCII) from tomato leaves were resolved into five polypeptide bands. All the polypeptides were matched with the genes encoding them by comparing amino acid sequences of tryptic peptides with gene sequences. The two major LHCII bands (usually comigrating as a `27 kDa' polypeptide) were encoded by cab1 and cab3 (Type I LHCII) genes. A third strong band or about 25 kDa was encoded by cab4 (Type II) genes. Polypeptides from two minor bands of 23-24 kDa were not N-teminally blocked; their N-terminal sequences showed they were Type III LHCII proteins. One complete cDNA clone and several incomplete clones for Type III polypeptides were sequenced. Combined with the peptide sequences, the results indicate that there are at least four different Type III genes in tomato, encoding four almost identical polypeptides. Thus, all the LHCII CAB polypeptides have been identified, and each type of LHCII polypeptide is encoded by distinct gene or genes in tomato.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/29980/1/0000344.pd

Characterization of a spinach psbS cDNA encoding the 22 kDa protein of photosystem II

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/117165/1/feb2001457939281463v.pd

Sequence of two tomato nuclear genes encoding chlorophyll a/b -binding proteins of CP24, a PSII antenna component

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/43424/1/11103_2004_Article_BF00017734.pd

Overexpression of the lemon basil α-zingiberene synthase gene increases both mono- and sesquiterpene contents in tomato fruit

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/75154/1/j.1365-313X.2008.03599.x.pd

Chloroplast DNA sequences integrated into an intron of a tomato nuclear gene

DNA sequences capable of hybridizing with chloroplast DNA have previously been reported to exist in the nuclear genome of higher plants. Here we show that the third intron of the cultivated tomato ( Lycopersicon esculentum ) nuclear gene Cab -7, which resides on chromosome 10 and which we recently cloned and sequenced, contains two DNA fragments derived from the coding region of the chloroplast gene psb G. The first fragment, 133 bp long, is located at a site 63 bp from the 3′ end of the 833 bp intron. The exact sequence of the 11 nucleotides at the 3′ end of the inserting chloroplast sequence is also found at the 5′ border of the insertion. A small (107 bp) chloroplast DNA fragment is inserted near the middle of the intron, again with the 3′ end of the inserting element (6 bp) duplicated at the 5′ border of the insertion. The second insert is a subfragment of the first insert, and is most likely directly derived from it. The psb G insertion sequence was found to be present in the Cab -7 gene of all tomato species examined but not in species from related genera (e.g. Solanum, Petunia, Nicotiana ), suggesting that the original transposition event (chloroplast to nucleus) occurred relatively recently-since the divergence of the genus Lycopersicon from other genera in the family Solanaceae, but before radiation of species in that genus.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/47568/1/438_2004_Article_BF00331304.pd

Nucleotide sequence and chromosomal location of Cab -7, the tomato gene encoding the type II chlorophyll a/b-binding polypeptide of photosystem I

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/43420/1/11103_2004_Article_BF00016015.pd

Methylation of somatic and sperm DNA in the homosporous fern Ceratopteris richardii

Plants, in general, have a high proportion of their CpG and CpNpG nucleotide motifs modified with 5-methylcytosine (5mC). Developmental changes in the proportion of 5mC are evident in mammals, particularly during gametogenesis and embryogenesis, but little information is available from flowering plants due to the intimate association of gametes with sporophytic tissues. In ferns, sperm are uninucleate and free-swimming and thus are easily isolated. We have examined 5mC in DNA isolated from fern sperm and other tissues with methylation-sensitive and -insensitive restriction enzyme isoschizomers, Southern blots probed with chloroplast and nuclear ribosomal RNA genes and end-labeled restriction fragments. We conclude that fern sperm DNA is methylated to a similar or greater degree than DNA isolated from either sporophytes or gametophytes.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/43445/1/11103_2004_Article_148087.pd

The Biosynthesis of Unusual Floral Volatiles and Blends Involved in Orchid Pollination by Deception: Current Progress and Future Prospects

Flowers have evolved diverse strategies to attract animal pollinators, with visual and olfactory floral cues often crucial for pollinator attraction. While most plants provide reward (e.g., nectar, pollen) in return for the service of pollination, 1000s of plant species, particularly in the orchid family, offer no apparent reward. Instead, they exploit their often specific pollinators (one or few) by mimicking signals of female insects, food source, and oviposition sites, among others. A full understanding of how these deceptive pollination strategies evolve and persist remains an open question. Nonetheless, there is growing evidence that unique blends that often contain unusual compounds in floral volatile constituents are often employed to secure pollination by deception. Thus, the ability of plants to rapidly evolve new pathways for synthesizing floral volatiles may hold the key to the widespread evolution of deceptive pollination. Yet, until now the biosynthesis of these volatile compounds has been largely neglected. While elucidating the biosynthesis in non-model systems is challenging, nonetheless, these cases may also offer untapped potential for biosynthetic breakthroughs given that some of the compounds can be exclusive or dominant components of the floral scent and production is often tissue-specific. In this perspective article, we first highlight the chemical diversity underpinning some of the more widespread deceptive orchid pollination strategies. Next, we explore the potential metabolic pathways and biosynthetic steps that might be involved. Finally, we offer recommendations to accelerate the discovery of the biochemical pathways in these challenging but intriguing systems.This work was supported by Australian Research Council projects DP1094453 and DP150102762 to RP and EP