More than symbioses : orchid ecology ; with examples from the Sydney Region

The Orchidaceae are one of the largest and most diverse families of flowering plants. Orchids grow as terrestrial, lithophytic, epiphytic or climbing herbs but most orchids native to the Sydney Region can be placed in one of two categories. The first consists of terrestrial, deciduous plants that live in fire-prone environments, die back seasonally to dormant underground root tubers, possess exclusively subterranean roots, which die off as the plants become dormant, and belong to the subfamily Orchidoideae. The second consists of epiphytic or lithophytic, evergreen plants that live in fire-free environments, either lack specialised storage structures or possess succulent stems or leaves that are unprotected from fire, possess aerial roots that grow over the surface of, or free of, the substrate, and which do not die off seasonally, and belong to the subfamily Epidendroideae. Orchid seeds are numerous and tiny, lacking cotyledons and endosperm and containing minimal nutrient reserves. Although the seeds of some species can commence germination on their own, all rely on infection by mycorrhizal fungi, which may be species-specific, to grow beyond the earliest stages of development. Many epidendroid orchids are viable from an early stage without their mycorrhizal fungi but most orchidoid orchids rely, at least to some extent, on their mycorrhizal fungi throughout their lives. Some are completely parasitic on their fungi and have lost the ability to photosynthesize. Some orchids parasitize highly pathogenic mycorrhizal fungi and are thus indirectly parasitic on other plants. Most orchids have specialised relationships with pollinating animals, with many species each pollinated by only one species of insect. Deceptive pollination systems, in which the plants provide no tangible reward to their pollinators, are common in the Orchidaceae. The most common form of deceit is food mimicry, while at least a few taxa mimic insect brood sites. At least six lineages of Australian orchids have independently evolved sexual deception. In this syndrome, a flower mimics the female of the pollinating insect species. Male insects are attracted to the flower and attempt to mate with it, and pollinate it in the process. Little is known of most aspects of the population ecology of orchids native to the Sydney Region, especially their responses to fire. Such knowledge would be very useful in informing decisions in wildlife management

Direct comparison of the performance of CZT detectors contacted with various metals

Cadmium Zinc Telluride (CZT) achieves excellent spatial resolution and good energy resolution over the broad energy range from several keV into the MeV energy range. In this paper we present the results of a systematic study of the performance of CZT detectors manufacturered by Orbotech (before IMARAD) depending on surface preparation, contact materials and contact deposition. The standard Orbotech detectors have the dimension of 2.0 x 2.0 x 0.5 cm. They have a pixellated In anode with 8 x 8 pixels and a monolithic In cathode. Using the same CZT substrates several times, we have made a direct comparison of the performance of different contact materials by replacing the cathode and/or the anode contacts with several high-workfunction metals. We present the performance of the detectors and conclude with an overview over our ongoing detector optimization.Comment: 8 pages, 5 figures, to appear in the proceedings of the conference 5922, "Hard X-Ray and Gamma-Ray Detector Physics VII" on the "Optics & Photonics 2005" SPIE Symposium, July 31- August 4, 2005, San Diego, C

Constructing Gravity Amplitudes from Real Soft and Collinear Factorisation

Soft and collinear factorisations can be used to construct expressions for amplitudes in theories of gravity. We generalise the "half-soft" functions used previously to "soft-lifting" functions and use these to generate tree and one-loop amplitudes. In particular we construct expressions for MHV tree amplitudes and the rational terms in one-loop amplitudes in the specific context of N=4 supergravity. To completely determine the rational terms collinear factorisation must also be used. The rational terms for N=4 have a remarkable diagrammatic interpretation as arising from algebraic link diagrams.Comment: 18 pages, axodraw, Proof of eq. 4.3 adde

Strength of the DTM RapidSteel 1.0 Material

This paper reports the results of a study into the strength of the DTM RapidSteel 1.0 material. Elastic modulus and strength of the metal/copper composite material was investigated as a function of the distance from the point of copper infiltration, the furnace cycle duration, and the furnace type. The microstructure of the RapidSteel material was also examined in an attempt to understand the science behind the infiltration process. The results have implications for the design of tools to be made using the RapidTool process in situations where the tool will be used as a production tool, rather than a prototype tool.Mechanical Engineerin

Effective Vortex Pinning in MgB2 thin films

We discuss pinning properties of MgB2 thin films grown by pulsed-laser deposition (PLD) and by electron-beam (EB) evaporation. Two mechanisms are identified that contribute most effectively to the pinning of vortices in randomly oriented films. The EB process produces low defected crystallites with small grain size providing enhanced pinning at grain boundaries without degradation of Tc. The PLD process produces films with structural disorder on a scale less that the coherence length that further improves pinning, but also depresses Tc

Methods for Determining the Statistical Significance of Enrichment or Depletion of Gene Ontology Classifications under Weighted Membership

High-throughput molecular biology studies, such as microarray assays of gene expression, two-hybrid experiments for detecting protein interactions, or ChIP-Seq experiments for transcription factor binding, often result in an “interesting” set of genes – say, genes that are co-expressed or bound by the same factor. One way of understanding the biological meaning of such a set is to consider what processes or functions, as defined in an ontology, are over-represented (enriched) or under-represented (depleted) among genes in the set. Usually, the significance of enrichment or depletion scores is based on simple statistical models and on the membership of genes in different classifications. We consider the more general problem of computing p-values for arbitrary integer additive statistics, or weighted membership functions. Such membership functions can be used to represent, for example, prior knowledge on the role of certain genes or classifications, differential importance of different classifications or genes to the experimenter, hierarchical relationships between classifications, or different degrees of interestingness or evidence for specific genes. We describe a generic dynamic programming algorithm that can compute exact p-values for arbitrary integer additive statistics. We also describe several optimizations for important special cases, which can provide orders-of-magnitude speed up in the computations. We apply our methods to datasets describing oxidative phosphorylation and parturition and compare p-values based on computations of several different statistics for measuring enrichment. We find major differences between p-values resulting from these statistics, and that some statistics recover “gold standard” annotations of the data better than others. Our work establishes a theoretical and algorithmic basis for far richer notions of enrichment or depletion of gene sets with respect to gene ontologies than has previously been available

The Decay Lifetime of Polarized Fermions in Flight

Based on the parity violation in Standard model, we study the dependence of lifetime on the helicity of an initial-state fermion in weak interactions. It is pointed out that if the initial fermions in the decays are longitudinally polarized, then the decay lifetime of left-handed polarized fermions is different from that of right-handed polarized fermions in flight with a same velocity in a same inertial system.Comment: 7 pages, Late

Material Properties Measurements for Selected Materials

Hugoniot equation of state measurements were made on Coconino sandstone, Vacaville basalt, Kaibab limestone, Mono Crater, pumice and Zelux (a polycarbonate resin) for pressures to 2 Mb. A single data point was obtained for fused quartz at 1.6 Mb. In addition to the hugoniot studies, the uniaxial compressive stress behavior of Vacaville basalt and Zelux was investigated at strain rates from about 10(exp -5)/sec to 10(exp 3)/second. The data presented include the stress - strain relations as a function of strain rate for these two materials

An improved continuous compositional-spread technique based on pulsed-laser deposition and applicable to large substrate areas

A new method for continuous compositional-spread (CCS) thin-film fabrication based on pulsed-laser deposition (PLD) is introduced. This approach is based on a translation of the substrate heater and the synchronized firing of the excimer laser, with the deposition occurring through a slit-shaped aperture. Alloying is achieved during film growth (possible at elevated temperature) by the repeated sequential deposition of sub-monolayer amounts. Our approach overcomes serious shortcomings in previous in-situ implementations of CCS based on sputtering or PLD, in particular the variations of thickness across the compositional spread and the differing deposition energetics as function of position. While moving-shutter techniques are appropriate for PLD-approaches yielding complete spreads on small substrates (i.e. small as compared to distances over which the deposition parameters in PLD vary, typically about 1 cm), our method can be used to fabricate samples that are large enough for individual compositions to be analyzed by conventional techniques, including temperature-dependent measurements of resistivity and dielectric and magnetic and properties (i.e. SQUID magnetometry). Initial results are shown for spreads of (Sr,Ca)RuO$_3$.Comment: 6 pages, 8 figures, accepted for publication in Rev. Sci. Instru