Symmetry-protected topological phases with charge and spin symmetries: response theory and dynamical gauge theory in 2D, 3D and the surface of 3D

A large class of symmetry-protected topological phases (SPT) in boson / spin systems have been recently predicted by the group cohomology theory. In this work, we consider SPT states at least with charge symmetry (U(1) or Z$_N$) or spin $S^z$ rotation symmetry (U(1) or Z$_N$) in 2D, 3D, and the surface of 3D. If both are U(1), we apply external electromagnetic field / `spin gauge field' to study the charge / spin response. For the SPT examples we consider (i.e. U$_c$(1)$\rtimes$Z$^T_2$, U$_s$(1)$\times$Z$^T_2$, U$_c$(1)$\times$[U$_s$(1)$\rtimes$Z$_2$]; subscripts $c$ and $s$ are short for charge and spin; Z$^T_2$ and Z$_2$ are time-reversal symmetry and $\pi$-rotation about $S^y$, respectively), many variants of Witten effect in the 3D SPT bulk and various versions of anomalous surface quantum Hall effect are defined and systematically investigated. If charge or spin symmetry reduces to Z$_N$ by considering charge-$N$ or spin-$N$ condensate, instead of the linear response approach, we gauge the charge/spin symmetry, leading to a dynamical gauge theory with some remaining global symmetry. The 3D dynamical gauge theory describes a symmetry-enriched topological phase (SET), i.e. a topologically ordered state with global symmetry which admits nontrivial ground state degeneracy depending on spatial manifold topology. For the SPT examples we consider, the corresponding SET states are described by dynamical topological gauge theory with topological BF term and axionic $\Theta$-term in 3D bulk. And the surface of SET is described by the chiral boson theory with quantum anomaly.Comment: 23 pages, 1 figure, REVTeX; Table II and Table III for summary of part of key result

Mechanism of unidirectional movement of kinesin motors

Kinesin motors have been studied extensively both experimentally and theoretically. However, the microscopic mechanism of the processive movement of kinesin is still an open question. In this paper, we propose a hand-over-hand model for the processivity of kinesin, which is based on chemical, mechanical, and electrical couplings. In the model the processive movement does not need to rely on the two heads' coordination in their ATP hydrolysis and mechanical cycles. Rather, the ATP hydrolyses at the two heads are independent. The much higher ATPase rate at the trailing head than the leading head makes the motor walk processively in a natural way, with one ATP being hydrolyzed per step. The model is consistent with the structural study of kinesin and the measured pathway of the kinesin ATPase. Using the model the estimated driving force of ~ 5.8 pN is in agreements with the experimental results (5~7.5 pN). The prediction of the moving time in one step (~10 microseconds) is also consistent with the measured values of 0~50 microseconds. The previous observation of substeps within the 8-nm step is explained. The shapes of velocity-load (both positive and negative) curves show resemblance to previous experimental results.Comment: 22 pages, 6 figure

Control of spiral waves and turbulent states in a cardiac model by travelling-wave perturbations

We propose a travelling-wave perturbation method to control the spatiotemporal dynamics in a cardiac model. It is numerically demonstrated that the method can successfully suppress the wave instability (alternans in action potential duration) in the one-dimensional case and convert spiral waves and turbulent states to the normal travelling wave states in the two-dimensional case. An experimental scheme is suggested which may provide a new design for a cardiac defibrillator.Comment: 9 pages, 5 figure

Model for processive movement of myosin V and myosin VI

Myosin V and myosin VI are two classes of two-headed molecular motors of the myosin superfamily that move processively along helical actin filaments in opposite directions. Here we present a hand-over-hand model for their processive movements. In the model, the moving direction of a dimeric molecular motor is automatically determined by the relative orientation between its two heads at free state and its head's binding orientation on track filament. This determines that myosin V moves toward the barbed end and myosin VI moves toward the pointed end of actin. During the moving period in one step, one head remains bound to actin for myosin V whereas two heads are detached for myosin VI: The moving manner is determined by the length of neck domain. This naturally explains the similar dynamic behaviors but opposite moving directions of myosin VI and mutant myosin V (the neck of which is truncated to only one-sixth of the native length). Because of different moving manners, myosin VI and mutant myosin V exhibit significantly broader step-size distribution than native myosin V. However, all three motors give the same mean step size of 36 nm (the pseudo-repeat of actin helix). Using the model we study the dynamics of myosin V quantitatively, with theoretical results in agreement with previous experimental ones.Comment: 18 pages, 7 figure

Quasiparticle interference of C2-symmetric surface states in LaOFeAs parent compound

We present scanning tunneling microscopy studies of the LaOFeAs parent compound of iron pnictide superconductors. Topographic imaging reveals two types of atomically flat surfaces, corresponding to the exposed LaO layer and FeAs layer respectively. On one type of surface, we observe strong standing wave patterns induced by quasiparticle interference of two-dimensional surface states. The distribution of scattering wavevectors exhibits pronounced two-fold symmetry, consistent with the nematic electronic structure found in the Ca(Fe1-xCox)2As2 parent state.Comment: 13 pages, 4 figure