Identification and characterisation of 17 polymorphic candidate genes for response to parasitic nematode (Trichostrongylus tenuis) infection in red grouse (Lagopus lagopus scotica)

Acknowledgements This study was funded by a BBSRC studentship (MA Wenzel) and NERC Grants NE/H00775X/1 and NE/D000602/1 (SB Piertney). We are grateful to Jacob Hoglund for providing willow grouse samples, Mario Roder, Keliya Bai, Marianne James, Matt Oliver, Gill Murray-Dickson, Francois Mougeot and Jesus Martınez-Padilla for help with fieldwork, and all grouse estate factors, owners and keepers, most particularly Alistair Mitchell, Shaila Rao, Christopher Murphy, Richard Cooke and Fred Taylor, for providing access to estate game larders.Peer reviewedPostprin

A transcriptomic investigation of handicap models in sexual selection

We are grateful to D. Calder and T. Helps for access to study sites, and G. Murray-Dickson and M. Oliver for help with fieldwork and comments on manuscript drafts. This work was funded by NERC grant NE/D000602/1 (SBP), a NERC advanced fellowship (FM) and a BBSRC studentship (MAW)Peer reviewedPostprin

Geometry of Non-Hausdorff Spaces and Its Significance for Physics

Hausdorff relation, topologically identifying points in a given space, belongs to elementary tools of modern mathematics. We show that if subtle enough mathematical methods are used to analyze this relation, the conclusions may be far-reaching and illuminating. Examples of situations in which the Hausdorff relation is of the total type, i.e., when it identifies all points of the considered space, are the space of Penrose tilings and space-times of some cosmological models with strong curvature singularities. With every Hausdorff relation a groupoid can be associated, and a convolutive algebra defined on it allows one to analyze the space that otherwise would remain intractable. The regular representation of this algebra in a bundle of Hilbert spaces leads to a von Neumann algebra of random operators. In this way, a probabilistic description (in a generalized sense) naturally takes over when the concept of point looses its meaning. In this situation counterparts of the position and momentum operators can be defined, and they satisfy a commutation relation which, in the suitable limiting case, reproduces the Heisenberg indeterminacy relation. It should be emphasized that this is neither an additional assumption nor an effect of a quantization process, but simply the consequence of a purely geometric analysis.Comment: 13 LaTex pages, no figure

HTC Scientific Computing in a Distributed Cloud Environment

This paper describes the use of a distributed cloud computing system for high-throughput computing (HTC) scientific applications. The distributed cloud computing system is composed of a number of separate Infrastructure-as-a-Service (IaaS) clouds that are utilized in a unified infrastructure. The distributed cloud has been in production-quality operation for two years with approximately 500,000 completed jobs where a typical workload has 500 simultaneous embarrassingly-parallel jobs that run for approximately 12 hours. We review the design and implementation of the system which is based on pre-existing components and a number of custom components. We discuss the operation of the system, and describe our plans for the expansion to more sites and increased computing capacity

Staling in two canned lager beers stored at different temperatures from sensory analyses and consumer ranking

Two canned lagers, lager A (5% abv with late hop character) and lager B (4% abv) stored for 0, 7, 14, 21 and 28 days at 4, 12, 30 and 37°C were scored by trained sensory assessors (10) for liking and stale and related attributes of: cabbagy, cardboard, catty, grainy, honey, leathery, metallic, musty, skunky, and sour. Principal component analysis explained 80% data variance in 3 significant (p < 0.05) and 75% in 4 significant factors for A and B, respectively. In both lagers, aging correlated significantly with stale, cabbagy and musty and in A with metallic and sour and in B with catty and skunky. Partial least squares regression (PLS1) models showed good explanations: stale had regression coefficients of 0.88 (calibration) and 0.84 (validation) for A, and 0.96 and 0.91 respectively, for B; for liking 0.92 and 0.90 for A and 0.96 and 0.93 for B. For both lagers, liking was positively correlated with honey and grainy, and inversely with staling attributes. Lagers from 30°C were ranked for liking by 40 consumers against fresh as a hidden reference. Significant (p = 0.05) ranking of A, but not B, correlated with that of trained assessors

Relationships of overall estery aroma character in lagers with volatile headspace congener concentrations

In lager beers the intensity of “estery” aroma character is re-garded as an important component of sensory quality, but its origins are somewhat uncertain. Overall “estery” aroma intensity was predicted from capillary gas chromatographic (GC) data following solid phase micro extraction (SPME) of headspaces. Estery character was scored in 23 commercial lagers using rank-rating, allowing assessors (13) constant access to a range of appropriate standards. From univariate data analysis, all asses-sors behaved similarly and lagers fell into three significantly different groups: low (1), high (1) and intermediate (21). The quantification of 36 flavour volatiles by SPME of headspaces was reproducible and principal component analysis explained 91% total variance. Multiple linear regression could utilise only a restricted (26) set of flavour volatiles, whereas partial least square regression, that considered all flavour components, showed significant differences and improved prediction. How-ever, an artificial neural network that could compensate for non-linearities and interactions in ester perception gave the most robust prediction at R2 = 0.88

Can a witness report hearsay evidence unintentionally? The effects of discussion on eyewitness memory

When eyewitnesses are exposed to misinformation about an event from a co-witness, they often incorporate this misinformation in their recall of the event. The current research aimed to investigate whether this memory conformity phenomenon is due to change in the witness's memory for the event, or to social pressures to conform to the co-witness's account. Participants were shown a crime video and then asked to discuss the video in groups, with some receiving misinformation about the event from their discussion partners. After a one week delay some participants were warned about possible misinformation before all participants provided their own account of the event. In Study 1, participants made remember/know judgments about the items recalled, and in Study 2 they indicated the source of their memories. Co-witness information was incorporated into participants' testimonies, and this effect was not reduced by warnings or source monitoring instructions, suggesting memory change may have occurred. However, there was some indication that remember/know judgments may help distinguish between "real" memories and co-witness information

Optimal embedding of a toroidal mesh in a path

We prove that the dilation of an $m \times n$ toroidal mesh in an $mn$-vertex path equals $2\min\{m,n\}$, if $m\not= n$ and $2n-1$, if $m=n$