Structures and photophysical properties of 3,4-diaryl-1H-pyrrol-2,5-diimines and 2,3-diarylmaleimides

Structural features of 3,4-diaryl-1H-pyrrol-2,5-diimines and their derivatives have been studied by molecular spectroscopy techniques, single-crystal X-ray diffraction, and DFT calculations. According to the theoretical calculations, the diimino tautomeric form of 3,4-diaryl-1H-pyrrol-2,5-diimines is more stable in solution than the imino-enamino form. We also found that the structurally related 2,3 exist in the solid state in the dimeric diketo form. 3,4-Diary1-1H-pyrrol-2,5-diimines and 2,3-diarylmaleimides exhibit fluorescence in the blue region of the visible spectrum. The fluorescence spectra have large Stokes shifts. Aryl substituents at the 3,4-positions of 1H-pyrrol-2,5-diimine do not significantly affect fluorescence properties. The insertion of donor substituents into 2,3diarylmaleimides leads to bathochromic shift of emission bands with hyperchromic effect. (C) 2017 Elsevier B.V. All rights reserved

Magnesiovesuvianite, Ca19Mg(Al,Mg)12Si18O69(OH)9, a new vesuvianite-group mineral

MagnesiovesuvianiteMagnesiovesuvianite (IMA 2015-104), ideally Ca19Mg(Al,Mg)12Si18O69(OH)9, a new vesuvianite-group member was found in an old museum specimen labelled as vesuvianite from the Tuydo combe, near Lojane, Republic of Macedonia. It occurs as radiating aggregates up to 2 cm across consisting of acicular tetragonal crystals (up to 7 mm long and 5–40 μm thick) with distinct fibre-optic effect. Associated minerals are calcite, garnet of the grossular-andradite series and clinochlore. Single crystals of magnesiovesuvianite are transparent, light pink with a silky lustre. Dominant crystal forms are {100}, {110}, {101} and {001}. The Mohs’ hardness is 6. Dmeas and Dcalc are 3.30(3) and 3.35 g/cm3, respectively. Mineral is optically uniaxial, negative, ω = 1.725(2), ε = 1.721(2). The chemical composition (wt.% electron-microprobe data) is: SiO2 36.73, Al2O3 20.21, CaO 36.50, MgO 1.80, MnO 0.18, FeO 0.04, Na2O 0.01, H2O 3.10, total 98.37. The empirical formula based on 19 (Ca + Na) apfu is (Ca18.99Na0.01)Σ19.00(Mg0.60Al0.40)Σ1.00(Al11.05Mg0.70Mn0.07Fe0.02)Σ11.84Si17.84O68.72(OH)9. Absorption bands in the IR spectrum are: 393, 412, 443, 492, 576, 606, 713, 802, 906, 968, 1024, 3200, 3450, 3630 cm-1. The eight strongest lines of the powder X-ray diffraction pattern are (I-d(Å)-hkl): 23-10.96-110, 22-3.46-240, 33-3.038-510, 100-2.740-432, 21-2.583-522, 94-2.365-620, 19-2.192-710, 25-1.6165. Magnesiovesuvianite is tetragonal, space group P4/n, unit-cell parameters refined from the powder data are a 15.5026(3), c 11.7858(5), V 2832.4(2) Å3, Z = 2. The crystal structure has been refined to R1 = 0.027 for 3266 unique observed reflections with |Fo| ≥ 4σF. The structure refinements provide scattering factors of the Y1A,B sites close to 12 e- that support predominant occupancy of these sites by the Mg2+ cations, in perfect agreement with the 27Al MAS NMR data. Magnesiovesuvianite is a member of the vesuvianite group with Mg2+ as a dominant cation at the Y1 site. The name magnesiovesuvianite is given to highlight the species-defining role of Mg.internal SPbU grant 3.38.136.2014 and the President of Russian Federation Grant for leading scientific schools (no. NSh-10005.2016.5

The Crystal Structure of Sergeysmirnovite, MgZn2(PO4)2·4H2O, and Complexity of the Hopeite Group and Related Structures

The crystal structure of sergeysmirnovite, MgZn2(PO4)2·4H2O (orthorhombic, Pnma, a = 10.6286(4), b = 18.3700(6), c = 5.02060(15) Å, V = 980.26(6) Å3, Z = 4), a new member of the hopeite group of minerals, was determined and refined to R1 = 0.030 using crystals from the Këster mineral deposit in Sakha-Yakutia, Russia. Similar to other members of the hopeite group, the crystal structure of sergeysmirnovite is based upon [Zn(PO4)]– layers interlinked via interstitial [MO2(H2O)4]2– octahedra, where M = Mg2+. The layers are parallel to the (010) plane. Within the layer, the ZnO4 tetrahedra share common corners to form chains running along [001]. Sergeysmirnovite is a dimorph of reaphookhillite, a mineral from the Reaphook Hill zinc deposit in South Australia. The relations between sergeysmirnovite and reaphookhillite are the same as those between hopeite and parahopeite. Topological and structural complexity analysis using information theory shows that the hopeite (sergeysmirnovite) structure type is more complex, both structurally and topologically, than the parahopeite (reaphookhillite) structure type. Such complexity relations contradict the general observation that more complex polymorphs possess higher physical density and higher stability, since parahopeite is denser than hopeite. It could be hypothesized that hopeite is metastable under ambient conditions and separated from parahopeite by a structural and topological reconstruction that requires an essential energy barrier that is difficult to overcome

The Crystal Structure of Sergeysmirnovite, MgZn₂(PO₄)₂·4H₂O, and Complexity of the Hopeite Group and Related Structures

The crystal structure of sergeysmirnovite, MgZn2(PO4)2·4H2O (orthorhombic, Pnma, a = 10.6286(4), b = 18.3700(6), c = 5.02060(15) Å, V = 980.26(6) Å3, Z = 4), a new member of the hopeite group of minerals, was determined and refined to R1 = 0.030 using crystals from the Këster mineral deposit in Sakha-Yakutia, Russia. Similar to other members of the hopeite group, the crystal structure of sergeysmirnovite is based upon [Zn(PO4)]– layers interlinked via interstitial [MO2(H2O)4]2– octahedra, where M = Mg2+. The layers are parallel to the (010) plane. Within the layer, the ZnO4 tetrahedra share common corners to form chains running along [001]. Sergeysmirnovite is a dimorph of reaphookhillite, a mineral from the Reaphook Hill zinc deposit in South Australia. The relations between sergeysmirnovite and reaphookhillite are the same as those between hopeite and parahopeite. Topological and structural complexity analysis using information theory shows that the hopeite (sergeysmirnovite) structure type is more complex, both structurally and topologically, than the parahopeite (reaphookhillite) structure type. Such complexity relations contradict the general observation that more complex polymorphs possess higher physical density and higher stability, since parahopeite is denser than hopeite. It could be hypothesized that hopeite is metastable under ambient conditions and separated from parahopeite by a structural and topological reconstruction that requires an essential energy barrier that is difficult to overcome

Dynamic Disorder of Fe3+ Ions in the Crystal Structure of Natural Barioferrite

A natural barioferrite, BaFe3+12O19, from a larnite–schorlomite–gehlenite vein of paralava within gehlenite hornfels of the Hatrurim Complex at Har Parsa, Negev Desert, Israel, was investigated by Raman spectroscopy, electron probe microanalysis, and single-crystal X-ray analyses acquired over the temperature range of 100–400 K. The crystals are up to 0.3 mm × 0.1 mm in size and form intergrowths with hematite, magnesioferrite, khesinite, and harmunite. The empirical formula of the barioferrite investigated is as follows: (Ba0.85Ca0.12Sr0.03)∑1(Fe3+10.72Al0.46Ti4+0.41Mg0.15Cu2+0.09Ca0.08Zn0.04Mn2+0.03Si0.01)∑11.99O19. The strongest bands in the Raman spectrum are as follows: 712, 682, 617, 515, 406, and 328 cm−1. The structure of natural barioferrite (P63/mmc, a = 5.8901(2) Å, c = 23.1235(6) Å, V = 694.75(4) Å3, Z = 2) is identical with the structure of synthetic barium ferrite and can be described as an interstratification of two fundamental blocks: spinel-like S-modules with a cubic stacking sequence and R-modules that have hexagonal stacking. The displacement ellipsoids of the trigonal bipyramidal site show elongation along the [001] direction during heating. As a function of temperature, the mean apical Fe–O bond lengths increase, whereas the equatorial bond lengths decrease, which indicates dynamic disorder at the Fe2 site

The Crystal Structure of Manganotychite, Na6Mn2(CO3)4(SO4), and Structural Relations in the Northupite Group

The crystal structure of manganotychite has been refined using the holotype specimen from the Alluaiv Mountain, Lovozero massif, Kola peninsula, Russia. The mineral is cubic, Fd3¯, a = 14.0015(3) Å, V = 2744.88(18) Å3, Z = 8, R1 = 0.020 for 388 independently observed reflections. Manganotychite is isotypic to tychite and ferrotychite. Its crystal structure is based upon a three-dimensional infinite framework formed by condensation of MnO6 octahedra and CO3 groups by sharing common O atoms. The sulfate groups and Na+ cations reside in the cavities of the octahedral-triangular metal-carbonate framework. In terms of symmetry and basic construction of the octahedral-triangular framework, the crystal structure of manganotychite is identical to that of northupite, Na3Mg(CO3)2Cl. The transition northupite → tychite can be described as a result of the multiatomic 2Cl− → (SO4)2− substitution, where both chlorine and sulfate ions are the extra-framework constituents. However, the positions occupied by sulfate groups and chlorine ions correspond to different octahedral cavities within the skeletons of Na atoms. The crystal structure of northupite can be considered as an interpenetration of two frameworks: anionic [Mg(CO3)2]2− octahedral-triangular framework and cationic [ClNa3]2− framework with the antipyrochlore topology. Both manganotychite and northupite structure types can be described as a modification of the crystal structure of diamond (or the dia net) via the following steps: (i) replacement of a vertex of the dia net by an M4 tetrahedron (no symmetry reduction); (ii) attachment of (CO3) triangles to the triangular faces of the M4 tetrahedra (accompanied by the Fd3¯m → Fd3¯ symmetry reduction); (iii) filling voids of the resulting framework by Na+ cations (no symmetry reduction); and (iv) filling voids of the Na skeleton by either sulfate groups (in tychite-type structures) or chlorine atoms (in northupite). As a result, the information-based structural complexity of manganotychite and northupite exceeds that of the dia net

Trigonal variation in the garnet supergroup: the crystal structure of nikmelnikovite, Ca₁₂Fe²⁺Fe³⁺₃Al₃(SiO₄)₆(OH)₂₀, from Kovdor massif, Kola Peninsula, Russia

AbstractThe crystal structure of nikmelnikovite, Ca12Fe2+Fe3+3Al3(SiO4)6(OH)20, a new member of the garnet supergroup from Kovdor massif, Kola Peninsula, Russia (R$\bar{3}$, a = 17.2072(6), c = 10.5689(4) Å, V = 2710.1(2) Å3 and Z = 3) has been refined to R1 = 0.046 on the basis of 1184 unique observed reflections. Nikmelnikovite is the first mineral species in the garnet supergroup that has a trigonal (rhombohedral) symmetry. The relationship between its unit cell and the pseudocubic (ideal garnet) unit cell can be described by the transformation matrix [1$\bar{1}$0 | 01$\bar{1}$ | ½½½]. The crystal-chemical relations between the ideal Ia$\bar{3}$d garnet and the nikmelnikovite structure type can be described by the following series of imaginary modifications: (1) the symmetry is lowered according to the Ia$\bar{3}$d → R$\bar{3}$ group–subgroup relationship; (2) the cation sites are split according to the following sequences: X → {X1, X2}; Y → {Y1, Y2, Y3, Y4}; Z → {Z1, Z2}; (3) the X sites remain fully occupied by Ca; (4) each Y site is occupied predominantly by a distinct chemical species: Y1 → Al (Al site), Y2 → Fe2+ (Fe1 site), Y3 → Fe3+ (Fe2 site), Y4 → vacancy (Mn site); (5) one of the Z sites (Z1) is occupied by Si, whereas the other site (Z2) is predominantly vacant. The crystal-chemical formula that takes into account the transition between the archetype and the nikmelnikovite structure type can be described as X{Ca12}Y[Fe2+Al4Fe3+2□]Z(Si6□6)O24(OH)20□4. The structural complexity of nikmelnikovite (4.529 bit/atom and 434.431 bit/cell, after H-correction) is higher than those for andradite, grossular and katoite, which is typical for low-temperature minerals formed after primary minerals with simpler structures.</jats:p

Eudialyte Group Minerals from the Lovozero Alkaline Massif, Russia: Occurrence, Chemical Composition, and Petrogenetic Significance

The Lovozero Alkaline Massif intruded through the Archean granite-gneiss and Devonian volcaniclastic rocks ca. 360 Ma ago and formed a large laccolith-type body. The lower part of the massif (the Layered complex) is composed of regularly repeating rhythms: melanocratic nepheline syenite (lujavrite, at the top), leucocratic nepheline syenite (foyaite), foidolite (urtite). The upper part of the massif (the Eudialyte complex) is indistinctly layered, and lujavrite enriched with eudialyte-group minerals (EGM) prevails there. In this article, we present the results of a study of the chemical composition and petrography of more than 400 samples of the EGM from the main types of rock of the Lovozero massif. In all types of rock, the EGM form at the late magmatic stage later than alkaline clinopyroxenes and amphiboles or simultaneously with it. When the crystallization of pyroxenes and EGM is simultaneous, the content of ferrous iron in the EGM composition increases. The Mn/Fe ratio in the EGM increases during fractional crystallization from lujavrite to foyaite and urtite. The same process leads to an increase in the modal content of EGM in the foyaite of the Layered complex and to the appearance of primary minerals of the lovozerite group in the foyaite of the Eudialyte complex.</jats:p

Thermal Behavior and Phase Transition of Uric Acid and Its Dihydrate Form, the Common Biominerals Uricite and Tinnunculite

Single crystals and powder samples of uric acid and uric acid dihydrate, known as uricite and tinnunculite biominerals, were extracted from renal stones and studied using single-crystal and powder X-ray diffraction (SC and PXRD) at various temperatures, as well as IR spectroscopy. The results of high-temperature PXRD experiments revealed that the structure of uricite is stable up to 380 °C, and then it loses crystallinity. The crystal structure of tinnunculite is relatively stable up to 40 °C, whereas above this temperature, rapid release of H2O molecules occurs followed by the direct transition to uricite phase without intermediate hydration states. SCXRD studies and IR spectroscopy data confirmed the similarity of uricite and tinnunculite crystal structures. SCXRD at low temperatures allowed us to determine the dynamics of the unit cells induced by temperature variations. The thermal behavior of uricite and tinnunculite is essentially anisotropic; the structures not only expand, but also contract with temperature increase. The maximal expansion occurs along the unit cell parameter of 7 Å (b in uricite and a in tinnunculite) as a result of the shifts of chains of H-bonded uric acid molecules and relaxation of the π-stacking forces, the weakest intermolecular interactions in these structures. The strongest contraction in the structure of uricite occurs perpendicular to the (101) plane, which is due to the orthogonalization of the monoclinic angle. The structure of tinnunculite also contracts along the [010] direction, which is mostly due to the stretching mechanism of the uric acid chains. These phase transitions that occur within the range of physiological temperatures emphasize the particular importance of the structural studies within the urate system, due to their importance in terms of human health. The removal of supersaturation in uric acid in urine at the initial stages of stone formation can occur due to the formation of metastable uric acid dihydrate in accordance with the Ostwald rule, which would serve as a nucleus for the subsequent growth of the stone at further formation stages; afterward, it irreversibly dehydrates into anhydrous uric acid.</jats:p