32 research outputs found
Time-Dependent Photodimerization of Ī±-<i>trans</i>-Cinnamic Acid Studied by Photocalorimetry and NMR Spectroscopy
The time course of
photochemical solid-state reactions is routinely
monitored by using spectroscopic methods such as NMR or IR spectroscopies,
but is comparatively less investigated with thermal methods. In this
work, a combination of thermal methods (thermogravimetric analysis
and differential scanning calorimetry) was applied together with irradiation
with UV light to quantify the conversion and monitor the progress
of a well-known photochemical reaction, the [2 + 2] dimerization of <i>trans</i>-cinnamic acid, and the results are compared with the
conversion determined by using <sup>1</sup>H NMR spectroscopy. The
conversion was correlated with thermodynamic parameters for the reactant
such as molar enthalpy, entropy, and melting temperature
Photoinduced Dynamics of Oxyluciferin Analogues: Unusual Enol āSuperāphotoacidity and Evidence for KetoāEnol Isomerization
The first systematic pico-nanosecond time-resolved spectroscopic
study of the firefly emitter oxyluciferin and two of its chemically
modified analogues revealed that in the excited state the enol group
is more acidic than the phenol group. The 6ā²-dehydroxylated
derivative, in which only the 4-enolic hydroxyl proton is acidic,
has an experimentally determined p<i>K</i><sub>a</sub>*
of 0.9 in dimethyl sulfoxide and an estimated p<i>K</i><sub>a</sub>* of ā0.3 in water. Moreover, this compound provided
direct evidence that in a nonpolar, basic environment the keto form
in the excited state can tautomerize into the enol, which subsequently
undergoes excited-state proton transfer (ESPT) to produce enolate
ion. This observation presents the first experimental evidence of
excited-state ketoāenol tautomerization of a firefly fluorophore,
and it could be important in resolving the enolāketo conundrum
related to the color-tuning mechanism of firefly bioluminescence.
The 6ā²-dehydroxylated form of oxyluciferin adds a very rare
case of a stable enol to the family of āsuperāphotoacids
Direct Observation of Asphaltene Nanoparticles on Model Mineral Substrates
The propensity for
adherence to solid surfaces of asphaltenes,
a complex solubility class of heteropolycyclic aromatic compounds
from the heavy fraction of crude oil, has long been the root cause
of scale deposition and remains an intractable problem in the petroleum
industry. Although the adhesion is essential to understanding the
process of asphaltene deposition, the relationship between the conformation
of asphaltene molecules on mineral substrates and its impact on adhesion
and mechanical properties of the deposits is not completely understood.
To rationalize the primary processes in the process of organic scale
deposition, here we use atomic force microscopy (AFM) to visualize
the morphology of petroleum asphaltenes deposited on model mineral
substrates. High imaging contrast was achieved by the differential
adhesion of the tip between asphaltenes and the mineral substrate.
While asphaltenes form smooth continuous films on all substrates at
higher concentrations, they deposit as individual nanoparticles at
lower concentrations. The size, shape, and spatial distribution of
the nanoaggregates are strongly affected by the nature of the substrate;
while uniformly distributed spherical particles are formed on highly
polar and hydrophilic substrates (mica), irregular islands and thicker
patches are observed with substrates of lower polarity (silica and
calcite). Asphaltene nanoparticles flatten when adsorbed on highly
oriented pyrolytic graphite due to ĻāĻ interactions
with the polycyclic core. Forceādistance profiles provide direct
evidence of the conformational changes of asphaltene molecules on
hydrophilic/hydrophobic substrates that result in dramatic changes
in adhesion and mechanical properties of asphaltene deposits. Such
an understanding of the nature of adhesion and mechanical properties
tuned by surface properties, on the level of asphaltene nanoaggregates,
would contribute to the design of efficient asphaltene inhibitors
for preventing asphaltene fouling on targeted surfaces. Unlike flat
surfaces, the AFM phase contrast images of defected calcite surfaces
show that asphaltenes form continuous deposits to fill the recesses,
and this process could trigger the onset for asphaltene deposition
Mechanistic Insight into Marine Bioluminescence: Photochemistry of the Chemiexcited Cypridina (Sea Firefly) Lumophore
Cypridina hilgendorfii (sea firefly)
is a bioluminescent crustacean whose bioluminescence (BL) reaction
is archetypal for a number of marine organisms, notably other bioluminescent
crustaceans and coelenterates. Unraveling the mechanism of its BL
is paramount for future applications of its strongly emissive lumophore. Cypridina produces light in a three-step reaction:
First, the cypridinid luciferin is activated by an enzyme to produce
a peroxide intermediate, cypridinid dioxetanone (CDO), which then
decomposes to generate excited oxyluciferin (OxyCLnH*). Finally, OxyCLnH*
deexcites to its ground state along with emission of bright blue light.
Unfortunately, the detailed mechanism of the critical step, the thermolysis
of CDO, remains unknown, and it is unclear whether the light emitter
is generated from a neutral form (CDOH) or anionic form (CDO<sup>ā</sup>) of the CDO precursor. In this work, we investigated the key step
in the process by modeling the thermal decompositions of both CDOH
and CDO<sup>ā</sup>. The calculated results indicate that the
decomposition of CDO<sup>ā</sup> occurs via the gradually reversible
charge transfer (CT)-initiated luminescence (GRCTIL) mechanism, whereas
CDOH decomposes through an entropic trapping mechanism without an
obvious CT process. The thermolysis of CDO<sup>ā</sup> is sensitive
to solvent effects and is energetically favorable in polar environments
compared with the thermolysis of CDOH. The thermolysis of CDO<sup>ā</sup> produces the excited oxyluciferin anion (OxyCLn<sup>ā</sup>*), which combines with a proton from the environment
to form OxyCLnH*, the actual light emitter for the natural system
Probing Structural Perturbation in a Bent Molecular Crystal with Synchrotron Infrared Microspectroscopy and Periodic Density Functional Theory Calculations
The
range of unit cell orientations generated at the kink of a
bent single crystal poses unsurmountable challenges with diffraction
analysis and limits the insight into the molecular-scale mechanism
of bending. On a plastically bent crystal of hexachlorobenzene, it
is demonstrated here that spatially resolved microfocus infrared spectroscopy
using synchrotron radiation can be applied in conjunction with periodic
density functional theory calculations to predict spectral changes
or to extract information on structural changes that occur as a consequence
of bending. The approach reproduces well the observed trends, such
as the wall effects, and provides estimations of the vibrational shifts,
unit cell deformations, and intramolecular parameters. Generally,
expansion of the lattice induces red-shift while compression induces
larger blue-shift of the characteristic Ī½Ā(CāC) and Ī½Ā(CāCl)
modes. Uniform or non-uniform expansion or contraction of the unit
cell of 0.1 Ć
results in shifts of several cm<sup>ā1</sup>, whereas deformation of the cell of 0.5Ā° at the unique angle
causes shifts of <0.5 cm<sup>ā1</sup>. Since this approach
does not include parameters related to the actual stimulus by which
the deformation has been induced, it can be generalized and applied
to other mechanically, photochemically, or thermally bent crystals
Glucosamine Salts: Resolving Ambiguities over the Market-Based Compositions
The neutral form of glucosamine, C<sub>6</sub>H<sub>13</sub>NO<sub>5</sub>, one the most effective and most widely used over-the-counter
health supplements for the relief of osteoarthritis, is very unstable
in air. It is marketed as chloride and sulfate salts. Unlike the stable
glucosamine chloride, direct use in pharmaceutical formulations of
the sulfate, ostensibly the physiologically more active form, is hindered
by its strong hygroscopicity. Copious patent literature exists describing
methods for stabilization of the sulfate by converting it into double
and/or mixed salts, usually with alkaline or earth alkaline sulfates
and chlorides. Aiming to unravel the structures of the alleged double/mixed
salts, we attempted synthesis of the stabilized forms of the sulfate
following literature procedures. Our repeated attempts did <i>not</i> yield true glucosamine sulfate or any real (in the chemical
sense) double or mixed salts. Instead, Fourier transform infrared
spectroscopy, powder X-ray diffraction, thermogravimetric analysis,
and elemental analyses consistently showed that physical mixtures
of the stable glucosamine chloride, which has a strong propensity
to crystallize out from solutions, and the respective alkaline salts
are obtained in all cases. Expectedly, these mixtures were non-hygroscopic.
The analysis of the commercially available sample of āglucosamine
sulfateā showed that it is a mixture of glucosamine chloride
and K<sub>2</sub>SO<sub>4</sub>, in accordance with the above conclusions.
By using a simple ion exchange in glucosamine chloride, we devised
a simple method to generate glucosamine sulfate. As anticipated, the
latter is a very hygroscopic powder in the solid state and is chemically
moderately unstable in solution. Along with the conclusions based
on the products obtained following published procedures, reaction
of this compound with alkali chlorides readily affords the (non-hygroscopic)
glucosamine chloride in a mixture with the respective alkali sulfates.
We are tempted to conclude that the alleged āstabilizationā
of glucosamine sulfate by formation of double/mixed salts is (in the
chemical sense) misleading. We believe that these compounds have probably
never been obtained, and the related published synthetic procedures
should be reinvestigated. The conclusions of this study could have
important implications on the effective amount of the active ingredient
required to achieve physiological activity, because such āstabilizedā
mixtures contain less than the optimal amount of the physiologically
active ingredient, which could also have some commercial implications
Biomimetic Crystalline Actuators: StructureāKinematic Aspects of the Self-Actuation and Motility of Thermosalient Crystals
While
self-actuation and motility are habitual for humans and nonsessile
animals, they are hardly intuitive for simple, lifeless, homogeneous
objects. Among mechanically responsive materials, the few accidentally
discovered examples of crystals that when heated suddenly jump, propelling
themselves to distances that can reach thousands of times their own
size in less than 1 ms, provide the most impressive display of the
conversion of heat into mechanical work. Such <i>thermosalient
crystals</i> are biomimetic, nonpolymeric self-actuators par
excellence. Yet, due to the exclusivity and incongruity of the phenomenon,
as well as because of the unavailability of ready analytical methodology
for its characterization, the reasons behind this colossal self-actuation
remain unexplained. Aimed at unraveling the mechanistic aspects of
the related processes, herein we establish the first systematic assessment
of the interplay among the thermodynamic, kinematic, structural, and
macroscopic factors driving the thermosalient phenomenon. The collective
results are consistent with a latent but very rapid anisotropic unit
cell deformation in a two-stage process that ultimately results in
crystal explosion, separation of debris, or crystal reshaping. The
structural perturbations point to a mechanism similar to phase transitions
of the martensitic family
Biomimetic Crystalline Actuators: StructureāKinematic Aspects of the Self-Actuation and Motility of Thermosalient Crystals
While
self-actuation and motility are habitual for humans and nonsessile
animals, they are hardly intuitive for simple, lifeless, homogeneous
objects. Among mechanically responsive materials, the few accidentally
discovered examples of crystals that when heated suddenly jump, propelling
themselves to distances that can reach thousands of times their own
size in less than 1 ms, provide the most impressive display of the
conversion of heat into mechanical work. Such <i>thermosalient
crystals</i> are biomimetic, nonpolymeric self-actuators par
excellence. Yet, due to the exclusivity and incongruity of the phenomenon,
as well as because of the unavailability of ready analytical methodology
for its characterization, the reasons behind this colossal self-actuation
remain unexplained. Aimed at unraveling the mechanistic aspects of
the related processes, herein we establish the first systematic assessment
of the interplay among the thermodynamic, kinematic, structural, and
macroscopic factors driving the thermosalient phenomenon. The collective
results are consistent with a latent but very rapid anisotropic unit
cell deformation in a two-stage process that ultimately results in
crystal explosion, separation of debris, or crystal reshaping. The
structural perturbations point to a mechanism similar to phase transitions
of the martensitic family
Biomimetic Crystalline Actuators: StructureāKinematic Aspects of the Self-Actuation and Motility of Thermosalient Crystals
While
self-actuation and motility are habitual for humans and nonsessile
animals, they are hardly intuitive for simple, lifeless, homogeneous
objects. Among mechanically responsive materials, the few accidentally
discovered examples of crystals that when heated suddenly jump, propelling
themselves to distances that can reach thousands of times their own
size in less than 1 ms, provide the most impressive display of the
conversion of heat into mechanical work. Such <i>thermosalient
crystals</i> are biomimetic, nonpolymeric self-actuators par
excellence. Yet, due to the exclusivity and incongruity of the phenomenon,
as well as because of the unavailability of ready analytical methodology
for its characterization, the reasons behind this colossal self-actuation
remain unexplained. Aimed at unraveling the mechanistic aspects of
the related processes, herein we establish the first systematic assessment
of the interplay among the thermodynamic, kinematic, structural, and
macroscopic factors driving the thermosalient phenomenon. The collective
results are consistent with a latent but very rapid anisotropic unit
cell deformation in a two-stage process that ultimately results in
crystal explosion, separation of debris, or crystal reshaping. The
structural perturbations point to a mechanism similar to phase transitions
of the martensitic family