43 research outputs found
Spin-valley phase diagram of the two-dimensional metal-insulator transition
Using symmetry breaking strain to tune the valley occupation of a
two-dimensional (2D) electron system in an AlAs quantum well, together with an
applied in-plane magnetic field to tune the spin polarization, we independently
control the system's valley and spin degrees of freedom and map out a
spin-valley phase diagram for the 2D metal-insulator transition. The insulating
phase occurs in the quadrant where the system is both spin- and
valley-polarized. This observation establishes the equivalent roles of spin and
valley degrees of freedom in the 2D metal-insulator transition.Comment: 4 pages, 2 figure
The trans-ancestral genomic architecture of glycemic traits
Glycemic traits are used to diagnose and monitor type 2 diabetes and cardiometabolic health. To date, most genetic studies of glycemic traits have focused on individuals of European ancestry. Here we aggregated genome-wide association studies comprising up to 281,416 individuals without diabetes (30% non-European ancestry) for whom fasting glucose, 2-h glucose after an oral glucose challenge, glycated hemoglobin and fasting insulin data were available. Trans-ancestry and single-ancestry meta-analyses identified 242âloci (99 novel; Pâ<â5âĂâ10â8), 80% of which had no significant evidence of between-ancestry heterogeneity. Analyses restricted to individuals of European ancestry with equivalent sample size would have led to 24 fewer new loci. Compared with single-ancestry analyses, equivalent-sized trans-ancestry fine-mapping reduced the number of estimated variants in 99% credible sets by a median of 37.5%. Genomic-feature, gene-expression and gene-set analyses revealed distinct biological signatures for each trait, highlighting different underlying biological pathways. Our results increase our understanding of diabetes pathophysiology by using trans-ancestry studies for improved power and resolution
A molecular analysis of desiccation tolerance mechanisms in the anhydrobiotic nematode Panagrolaimus superbus using expressed sequenced tags
<p>Abstract</p> <p>Background</p> <p>Some organisms can survive extreme desiccation by entering into a state of suspended animation known as anhydrobiosis. <it>Panagrolaimus superbus </it>is a free-living anhydrobiotic nematode that can survive rapid environmental desiccation. The mechanisms that <it>P. superbus </it>uses to combat the potentially lethal effects of cellular dehydration may include the constitutive and inducible expression of protective molecules, along with behavioural and/or morphological adaptations that slow the rate of cellular water loss. In addition, inducible repair and revival programmes may also be required for successful rehydration and recovery from anhydrobiosis.</p> <p>Results</p> <p>To identify constitutively expressed candidate anhydrobiotic genes we obtained 9,216 ESTs from an unstressed mixed stage population of <it>P. superbus</it>. We derived 4,009 unigenes from these ESTs. These unigene annotations and sequences can be accessed at <url>http://www.nematodes.org/nembase4/species_info.php?species=PSC</url>. We manually annotated a set of 187 constitutively expressed candidate anhydrobiotic genes from <it>P. superbus</it>. Notable among those is a putative lineage expansion of the <it>lea </it>(late embryogenesis abundant) gene family. The most abundantly expressed sequence was a member of the nematode specific <it>sxp/ral-2 </it>family that is highly expressed in parasitic nematodes and secreted onto the surface of the nematodes' cuticles. There were 2,059 novel unigenes (51.7% of the total), 149 of which are predicted to encode intrinsically disordered proteins lacking a fixed tertiary structure. One unigene may encode an exo-β-1,3-glucanase (GHF5 family), most similar to a sequence from <it>Phytophthora infestans</it>. GHF5 enzymes have been reported from several species of plant parasitic nematodes, with horizontal gene transfer (HGT) from bacteria proposed to explain their evolutionary origin. This <it>P. superbus </it>sequence represents another possible HGT event within the Nematoda. The expression of five of the 19 putative stress response genes tested was upregulated in response to desiccation. These were the antioxidants <it>glutathione peroxidase, dj-1 </it>and <it>1-Cys peroxiredoxin</it>, an <it>shsp </it>sequence and an <it>lea </it>gene.</p> <p>Conclusions</p> <p><it>P. superbus </it>appears to utilise a strategy of combined constitutive and inducible gene expression in preparation for entry into anhydrobiosis. The apparent lineage expansion of <it>lea </it>genes, together with their constitutive and inducible expression, suggests that LEA3 proteins are important components of the anhydrobiotic protection repertoire of <it>P. superbus</it>.</p
Trimming of 3D solid finite element meshes using parametric surfaces: Application to sheet metal forming
In this paper we present a methodology for trimming 3D solid finite element meshes using a non-uniform rational B-spline (NURBS) surfaces representation. The algorithms applied in the identification of the spatial position of the finite element (FE) nodes and elements relative to the trimming surface are described, as well as, the explanation of the correction methods adopted to geometrically rearrange the trimmed elements. Three different strategies are proposed to adjust, with greater or lesser accuracy, the trimmed FE mesh to the trimming surface. The first consists only of an element elimination strategy, while the other two are based on a nodal stretching strategy, aiming for more accurate adjustment of the finite elements boundary to the trimming surface. Finally, to highlight the capabilities of the developed program, a mesh generation example is given by trimming a mesh with the shape of a blank automotive panel.http://www.sciencedirect.com/science/article/B6V36-4JRVFN3-2/1/078cbd1a7575b0b9404142eb6d543aa