3,609 research outputs found
Natural genetic engineering: intelligence & design in evolution?
There are many things that I like about James Shapiro's new book "Evolution: A View from the 21st Century" (FT Press Science, 2011). He begins the book by saying that it is the creation of novelty, and not selection, that is important in the history of life. In the presence of heritable traits that vary, selection results in the evolution of a population towards an optimal composition of those traits. But selection can only act on changes - and where does this variation come from? Historically, the creation of novelty has been assumed to be the result of random chance or accident. And yet, organisms seem 'designed'. When one examines the data from sequenced genomes, the changes appear NOT to be random or accidental, but one observes that whole chunks of the genome come and go. These 'chunks' often contain functional units, encoding sets of genes that together can perform some specific function. Shapiro argues that what we see in genomes is 'Natural Genetic Engineering', or designed evolution: "Thinking about genomes from an informatics perspective, it is apparent that systems engineering is a better metaphor for the evolutionary process than the conventional view of evolution as a select-biased random walk through limitless space of possible DNA configurations" (page 6)
Quantitative first-pass MRI measures increased myocardial perfusion after vasodilation in mice
Re-weighting of somatosensory inputs from the foot and the ankle for controlling posture during quiet standing following trunk extensor muscles fatigue
The present study focused on the effects of trunk extensor muscles fatigue on
postural control during quiet standing under different somatosensory conditions
from the foot and the ankle. With this aim, 20 young healthy adults were asked
to stand as immobile as possible in two conditions of No fatigue and Fatigue of
trunk extensor muscles. In Experiment 1 (n = 10), somatosensation from the foot
and the ankle was degraded by standing on a foam surface. In Experiment 2 (n =
10), somatosensation from the foot and ankle was facilitated through the
increased cutaneous feedback at the foot and ankle provided by strips of
athletic tape applied across both ankle joints. The centre of foot pressure
displacements (CoP) were recorded using a force platform. The results showed
that (1) trunk extensor muscles fatigue increased CoP displacements under
normal somatosensatory conditions (Experiment 1 and Experiment 2), (2) this
destabilizing effect was exacerbated when somatosensation from the foot and the
ankle was degraded (Experiment 1), and (3) this destabilizing effect was
mitigated when somatosensation from the foot and the ankle was facilitated
(Experiment 2). Altogether, the present findings evidenced re-weighting of
sensory cues for controlling posture during quiet standing following trunk
extensor muscles fatigue by increasing the reliance on the somatosensory inputs
from the foot and the ankle. This could have implications in clinical and
rehabilitative areas
Impact of Indirect Contacts in Emerging Infectious Disease on Social Networks
Interaction patterns among individuals play vital roles in spreading
infectious diseases. Understanding these patterns and integrating their impact
in modeling diffusion dynamics of infectious diseases are important for
epidemiological studies. Current network-based diffusion models assume that
diseases transmit through interactions where both infected and susceptible
individuals are co-located at the same time. However, there are several
infectious diseases that can transmit when a susceptible individual visits a
location after an infected individual has left. Recently, we introduced a
diffusion model called same place different time (SPDT) transmission to capture
the indirect transmissions that happen when an infected individual leaves
before a susceptible individual's arrival along with direct transmissions. In
this paper, we demonstrate how these indirect transmission links significantly
enhance the emergence of infectious diseases simulating airborne disease
spreading on a synthetic social contact network. We denote individuals having
indirect links but no direct links during their infectious periods as hidden
spreaders. Our simulation shows that indirect links play similar roles of
direct links and a single hidden spreader can cause large outbreak in the SPDT
model which causes no infection in the current model based on direct link. Our
work opens new direction in modeling infectious diseases.Comment: Workshop on Big Data Analytics for Social Computing,201
Thin film encapsulation for organic light-emitting diodes using inorganic/organic hybrid layers by atomic layer deposition
A study of observation scales based on Felzenswalb-Huttenlocher dissimilarity measure for hierarchical segmentation
International audienceHierarchical image segmentation provides a region-oriented scale-space, i.e., a set of image segmentations at different detail levels in which the segmentations at finer levels are nested with respect to those at coarser levels. GuimarĂŁes et al. proposed a hierarchical graph based image segmentation (HGB) method based on the Felzenszwalb-Huttenlocher dissimilarity. This HGB method computes, for each edge of a graph, the minimum scale in a hierarchy at which two regions linked by this edge should merge according to the dissimilarity. In order to generalize this method, we first propose an algorithm to compute the intervals which contain all the observation scales at which the associated regions should merge. Then, following the current trend in mathematical morphology to study criteria which are not increasing on a hierarchy, we present various strategies to select a significant observation scale in these intervals. We use the BSDS dataset to assess our observation scale selection methods. The experiments show that some of these strategies lead to better segmentation results than the ones obtained with the original HGB method
Identification of blood-based molecular signatures for prediction of response and relapse in schizophrenia patients
The current inability of psychiatric medicine to objectively select the most appropriate treatment or to predict imminent relapse are major factors contributing to the severity and clinical burden of schizophrenia. We have previously used multiplexed immunoassays to show that schizophrenia patients have a distinctive molecular signature in serum compared with healthy control subjects. In the present study, we used the same approach to measure biomarkers in a population of 77 schizophrenia patients who were followed up over 25 months with four aims: (1) to identify molecules associated with symptom severity in antipsychotic naive and unmedicated patients, (2) to determine biomarker signatures that could predict response over a 6-week treatment period, (3) to identify molecular panels that could predict the time to relapse in a cross-sectional population of patients in remission and (4) to investigate how the biological relapse signature changed throughout the treatment course. This led to identification of molecular signatures that could predict symptom improvement over the first 6 weeks of treatment as well as predict time to relapse in a subset of 18 patients who experienced recurrence of symptoms. This study provides the groundwork for the development of novel objective clinical tests that can help psychiatrists in the clinical management of schizophrenia
Genetic variability of the P120' surface protein gene of Mycoplasma hominis isolates recovered from Tunisian patients with uro-genital and infertility disorders
<p>Abstract</p> <p>Background</p> <p>Among the surface antigens of <it>Mycoplasma hominis</it>, the P120' protein was previously shown to elicit a subtle antibody response and appears to be relatively conserved. To get better insight into the evolution of this protein, we analysed the genetic variability of its surface exposed region in 27 <it>M. hominis </it>isolates recovered from the genital tract of Tunisian patients with infertility disorders.</p> <p>Methods</p> <p>All specimens were processed for culture and PCR amplification of the N-terminal surface exposed region of p120' gene. PCR products were sequenced to evaluate the genetic variability, to test for adaptive selection, and to infer the phylogenetic relationship of the <it>M. hominis </it>isolates.</p> <p>Results</p> <p>Sequence analysis showed a total of 25 single nucleotide polymorphisms distributed through 23 polymorphic sites, yielding 13 haplotypes. All but one mutation were confined within three distinct regions. Analysis of the amino acid-based phylogenetic tree showed a predominant group of 17 closely related isolates while the remaining appear to have significantly diverged.</p> <p>Conclusion</p> <p>By analysing a larger sample of <it>M. hominis </it>recovered from patients with urogenital infections, we show here that the P120' protein undergoes substantial level of genetic variability at its surface exposed region.</p
Contribution of microscopy for understanding the mechanism of action against trypanosomatids
Transmission electron microscopy (TEM) has proved to be a useful tool to study the ultrastructural alterations and the target organelles of new antitrypanosomatid drugs. Thus, it has been observed that sesquiterpene lactones induce diverse ultrastructural alterations in both T. cruzi and Leishmania spp., such as cytoplasmic vacuolization, appearance of multilamellar structures, condensation of nuclear DNA, and, in some cases, an important accumulation of lipid vacuoles. This accumulation could be related to apoptotic events. Some of the sesquiterpene lactones (e.g., psilostachyin) have also been demonstrated to cause an intense mitochondrial swelling accompanied by a visible kinetoplast deformation as well as the appearance of multivesicular bodies. This mitochondrial swelling could be related to the generation of oxidative stress and associated to alterations in the ergosterol metabolism. The appearance of multilamellar structures and multiple kinetoplasts and flagella induced by the sesquiterpene lactone psilostachyin C indicates that this compound would act at the parasite cell cycle level, in an intermediate stage between kinetoplast segregation and nuclear division. In turn, the diterpene lactone icetexane has proved to induce the external membrane budding on T. cruzi together with an apparent disorganization of the pericellar cytoskeleton. Thus, ultrastructural TEM studies allow elucidating the possible mechanisms and the subsequent identification of molecular targets for the action of natural compounds on trypanosomatids.Fil: Lozano, Esteban SebastiĂĄn. Consejo Nacional de Investigaciones CientĂficas y TĂ©cnicas. Centro CientĂfico TecnolĂłgico Conicet - Mendoza. Instituto de Medicina y BiologĂa Experimental de Cuyo; ArgentinaFil: Spina Zapata, Renata MarĂa. Consejo Nacional de Investigaciones CientĂficas y TĂ©cnicas. Centro CientĂfico TecnolĂłgico Conicet - Mendoza. Instituto de HistologĂa y EmbriologĂa de Mendoza Dr. Mario H. Burgos. Universidad Nacional de Cuyo. Facultad de Ciencias MĂ©dicas. Instituto de HistologĂa y EmbriologĂa de Mendoza Dr. Mario H. Burgos; ArgentinaFil: Barrera, Patricia Andrea. Consejo Nacional de Investigaciones CientĂficas y TĂ©cnicas. Centro CientĂfico TecnolĂłgico Conicet - Mendoza. Instituto de HistologĂa y EmbriologĂa de Mendoza Dr. Mario H. Burgos. Universidad Nacional de Cuyo. Facultad de Ciencias MĂ©dicas. Instituto de HistologĂa y EmbriologĂa de Mendoza Dr. Mario H. Burgos; ArgentinaFil: Tonn, Carlos Eugenio. Consejo Nacional de Investigaciones CientĂficas y TĂ©cnicas. Centro CientĂfico TecnolĂłgico Conicet - San Luis. Instituto de Investigaciones en TecnologĂa QuĂmica. Universidad Nacional de San Luis. Facultad de QuĂmica, BioquĂmica y Farmacia. Instituto de Investigaciones en TecnologĂa QuĂmica; ArgentinaFil: Sosa Escudero, Miguel Angel. Consejo Nacional de Investigaciones CientĂficas y TĂ©cnicas. Centro CientĂfico TecnolĂłgico Conicet - Mendoza. Instituto de HistologĂa y EmbriologĂa de Mendoza Dr. Mario H. Burgos. Universidad Nacional de Cuyo. Facultad de Ciencias MĂ©dicas. Instituto de HistologĂa y EmbriologĂa de Mendoza Dr. Mario H. Burgos; Argentin
Choroid vascular occlusion and ischemic optic neuropathy after facial calcium hydroxyapatite injection- a case report
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