Decoherence and Spin Echo in Biological Systems

The spin echo approach is extended to include bio-complexes for which the interaction with dynamical noise is strong. Significant restoration of the free induction decay signal due to homogeneous (decoherence) and inhomogeneous (dephasing) broadening is demonstrated analytically and numerically, for both an individual dimer of interacting chlorophylls and for an ensemble of dimers. This approach is based on an exact and closed system of ordinary differential equations that can be easily solved for a wide range of parameters that are relevant for bio-applications.Comment: 5 pages, 5 figure

Non-Hermitian Adiabatic Quantum Optimization

We propose a novel non-Hermitian adiabatic quantum optimization algorithm. One of the new ideas is to use a non-Hermitian auxiliary "initial'' Hamiltonian that provides an effective level repulsion for the main Hamiltonian. This effect enables us to develop an adiabatic theory which determines ground state much more efficiently than Hermitian methods.Comment: Minor corrections, 1 figure, 9 page

Non-Hermitian description of a superconducting phase qubit measurement

We present an approach based on a non-Hermitian Hamiltonian to describe the process of measurement by tunneling of a phase qubit state. We derive simple analytical expressions which describe the dynamics of measurement, and compare our results with those experimentally available.Comment: 8 pages, 4 figure

Narrow scope for resolution-limit-free community detection

Detecting communities in large networks has drawn much attention over the years. While modularity remains one of the more popular methods of community detection, the so-called resolution limit remains a significant drawback. To overcome this issue, it was recently suggested that instead of comparing the network to a random null model, as is done in modularity, it should be compared to a constant factor. However, it is unclear what is meant exactly by "resolution-limit-free", that is, not suffering from the resolution limit. Furthermore, the question remains what other methods could be classified as resolution-limit-free. In this paper we suggest a rigorous definition and derive some basic properties of resolution-limit-free methods. More importantly, we are able to prove exactly which class of community detection methods are resolution-limit-free. Furthermore, we analyze which methods are not resolution-limit-free, suggesting there is only a limited scope for resolution-limit-free community detection methods. Finally, we provide such a natural formulation, and show it performs superbly

A non-associative quantum mechanics

A non-associative quantum mechanics is proposed in which the product of three and more operators can be non-associative one. The multiplication rules of the octonions define the multiplication rules of the corresponding operators with quantum corrections. The self-consistency of the operator algebra is proved for the product of three operators. Some properties of the non-associative quantum mechanics are considered. It is proposed that some generalization of the non-associative algebra of quantum operators can be helpful for understanding of the algebra of field operators with a strong interaction.Comment: one typo in Eq. (23) is correcte