Translucent windows: How uncertainty in competitive interactions impacts detection of community pattern

Trait variation and similarity among coexisting species can provide a window into the mechanisms that maintain their coexistence. Recent theoretical explorations suggest that competitive interactions will lead to groups, or clusters, of species with similar traits. However, theoretical predictions typically assume complete knowledge of the map between competition and measured traits. These assumptions limit the plausible application of these patterns for inferring competitive interactions in nature. Here we relax these restrictions and find that the clustering pattern is robust to contributions of unknown or unobserved niche axes. However, it may not be visible unless measured traits are close proxies for niche strategies. We conclude that patterns along single niche axes may reveal properties of interspecific competition in nature, but detecting these patterns requires natural history expertise firmly tying traits to niches.Comment: Main text: 18 pages, 6 figures. Appendices: A-G, 6 supplementary figures. This is the peer reviewed version of the article of the same title which has been accepted for publication at Ecology Letters. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Self-Archivin

Use of axonal projection patterns for the homologisation of cerebral nerves in Opisthobranchia, Mollusca and Gastropoda

Introduction: Gastropoda are guided by several sensory organs in the head region, referred to as cephalic sensory organs (CSOs). These CSOs are innervated by distinct nerves. This study proposes a unified terminology for the cerebral nerves and the categories of CSOs and then investigates the neuroanatomy and cellular innervation patterns of these cerebral nerves, in order to homologise them. The homologisation of the cerebral nerves in conjunction with other data, e.g. ontogenetic development or functional morphology, may then provide insights into the homology of the CSOs themselves. Results: Nickel-lysine axonal tracing (“backfilling”) was used to stain the somata projecting into specific nerves in representatives of opisthobranch Gastropoda. Tracing patterns revealed the occurrence, size and relative position of somata and their axons and enabled these somata to be mapped to specific cell clusters. Assignment of cells to clusters followed a conservative approach based primarily on relative location of the cells. Each of the four investigated cerebral nerves could be uniquely identified due to a characteristic set of soma clusters projecting into the respective nerves via their axonal pathways. Conclusions: As the described tracing patterns are highly conserved morphological characters, they can be used to homologise nerves within the investigated group of gastropods. The combination of adequate number of replicates and a comparative approach allows us to provide preliminary hypotheses on homologies for the cerebral nerves. Based on the hypotheses regarding cerebral nerve homology together with further data on ultrastructure and immunohistochemistry of CSOs published elsewhere, we can propose preliminary hypotheses regarding homology for the CSOs of the Opisthobranchia themselves

Long-time tails and cage effect in driven granular fluids

We study the velocity autocorrelation function (VACF) of a driven granular fluid in the stationary state in 3 dimensions. As the critical volume fraction of the glass transition in the corresponding elastic system is approached, we observe pronounced cage effects in the VACF as well as a strong decrease of the diffusion constant. At moderate densities the VACF is shown to decay algebraically in time (t^{-3/2}) like in a molecular fluid, as long as the driving conserves momentum locally.Comment: 4 pages, 4 figure

The fishery for California market squid (Loligo opalescens) (Cephalopoda: Myopsida), from 1981 through 2003

The California market squid (Loligo opalescens) has been harvested since the 1860s and it has become the largest fishery in California in terms of tonnage and dollars since 1993. The fishery began in Monterey Bay and then shifted to southern California, where effort has increased steadily since 1983. The California Department of Fish and Game (CDFG) collects information on landings of squid, including tonnage, location, and date of capture. We compared landings data gathered by CDFG with sea surface temperature (SST), upwelling index (UI), the southern oscillation index (SOI), and their respective anomalies. We found that the squid fishery in Monterey Bay expends twice the effort of that in southern California. Squid landings decreased substantially following large El Niño events in 1982−83 and 1997−98, but not following the smaller El Niño events of 1987 and 1992. Spectral analysis revealed autocorrelation at annual and 4.5-year intervals (similar to the time period between El Niño cycles). But this analysis did not reveal any fortnightly or monthly spawning peaks, thus squid spawning did not correlate with tides. A paralarvae density index (PDI) for February correlated well with catch per unit of effort (CPUE) for the following November recruitment of adults to the spawning grounds. This stock– recruitment analysis was significant for 2000−03 (CPUE=8.42+0.41PDI, adjusted coefficient of determination, r2=0.978, P=0.0074). Surveys of squid paralarvae explained 97.8% of the variance for catches of adult squid nine months later. The regression of CPUE on PDI could be used to manage the fishery. Catch limits for the fishery could be set on the basis of paralarvae abundance surveyed nine months earlier

Validation of Survey Data on Income and Employment: The ISMIE Experience

This report derives from the project "Improving survey measurement of income and employment (ISMIE)" which investigates measurement error in survey data on income and employment, using a UK sub-sample of the European Household Community Panel (ECHP). In this paper we describe the process of collecting validation data and the outcomes of the process. Validation data were obtained from two sources: employers' records and government benefit data from the Department for Work and Pensions (DWP). The former provided information on occupation and employment status, gross and net pay, membership of company pension schemes and industry sector. The latter provided histories of benefit receipt and tax credits, for example, child, disability, housing and unemployment benefits, pensions and income support. In the survey interview, respondents were asked for written permission both to obtain their DWP records and to contact their employer. They were also asked to provide information that would facilitate the process of obtaining the validation data: National Insurance number (NINO) and employer contact details. Subsequently, DWP records were extracted using a non-hierarchical matching strategy, based on different combinations of identifying variables obtained in the survey (NINO, sex, date of birth, name and postcode), and a survey of employers was carried out (mail, with telephone follow-up). The representativeness of the validation samples obtained depends on the co-operation of both survey respondents and providers of validation data, as well as errors in the matching process. We report permission rates, proportions providing matching items, match rates for the DWP data and response rates to the employer survey. We identify correlates of these measures of success at each stage of the validation process in terms of substantive characteristics of the survey respondents. Variation by subgroups is identified and implications for the representativeness of the validation sample are discussed.

The Effects of Dependent Interviewing on Responses to Questions on Income Sources

Using an experimental design, we compare two alternative approaches to dependent interviewing (proactive and reactive) with traditional independent interviewing on a module of questions about sources of income. We believe this to be the first large-scale quantitative comparison of proactive and reactive dependent interviewing. The three approaches to questioning are compared in terms of their impact on under-reporting of income sources and related bivariate statistics. The study design also enables identification of the characteristics of respondents whose responses are sensitive to the mode of interviewing. We conclude that under-reporting can be significantly greater with independent interviewing than with either form of dependent interviewing, especially for income sources that are relatively common or relatively easy to forget. We find that dependent interviewing is particularly helpful as a recall aid for respondents below retirement age and registered disabled persons.

Patterns of Consent: Evidence from a General Household Survey

We analyse consent patterns and consent bias in the context of a large general household survey, the 'Improving survey measurement of income and employment' (ISMIE) survey, also addressing issues that arise when there are multiple consent questions. Using a multivariate probit regression model for four binary outcomes with two incidental truncations, we show that there are biases in consent to data linkage with benefit and tax credit administrative records held by the Department for Work and Pensions, and with wage and employment data held by employers, and also in respondents' willingness and ability to supply their National Insurance Number. The biases differ according to the question considered, however. We also show that modelling consent questions independently rather than jointly may lead to misleading inferences about consent bias. A positive correlation between unobservable individual factors affecting consent to DWP record linkage and consent to employer record linkage is suggestive of a latent individual consent propensity.Informed consent; Household surveys; Consent bias; Selection bias; Multivariate probit; Incidental truncation; Data linkage; National Insurance number

Local Equation of State and Velocity Distributions of a Driven Granular Gas

We present event-driven simulations of a granular gas of inelastic hard disks with incomplete normal restitution in two dimensions between vibrating walls (without gravity). We measure hydrodynamic quantities such as the stress tensor, density and temperature profiles, as well as velocity distributions. Relating the local pressure to the local temperature and local density, we construct a local constitutive equation. For strong inelasticities the local constitutive relation depends on global system parameters, like the volume fraction and the aspect ratio. For moderate inelasticities the constitutive relation is approximately independent of the system parameters and can hence be regarded as a local equation of state, even though the system is highly inhomogeneous with heterogeneous temperature and density profiles arising as a consequence of the energy injection. Concerning the local velocity distributions we find that they do not scale with the square root of the local granular temperature. Moreover the high-velocity tails are different for the distribution of the x- and the y-component of the velocity, and even depend on the position in the sample, the global volume fraction, and the coefficient of restitution.Comment: 14 pages, 14 figures of which Figs. 13a-f and Fig. 14 are archived as separate .gif files due to upload-size limitations. A version of the paper including all figures in better quality can be downloaded at http://www.theorie.physik.uni-goettingen.de/~herbst/download/LocEqSt.ps.gz (3.8 MB, ps.gz) or at http://www.theorie.physik.uni-goettingen.de/~herbst/download/LocEqSt.pdf (4.9 MB, pdf

Glassy correlations and microstructures in randomly crosslinked homopolymer blends

We consider a microscopic model of a polymer blend that is prone to phase separation. Permanent crosslinks are introduced between randomly chosen pairs of monomers, drawn from the Deam-Edwards distribution. Thereby, not only density but also concentration fluctuations of the melt are quenched-in in the gel state, which emerges upon sufficient crosslinking. We derive a Landau expansion in terms of the order parameters for gelation and phase separation, and analyze it on the mean-field level, including Gaussian fluctuations. The mixed gel is characterized by thermal as well as time-persistent (glassy) concentration fluctuations. Whereas the former are independent of the preparation state, the latter reflect the concentration fluctuations at the instant of crosslinking, provided the mesh size is smaller than the correlation length of phase separation. The mixed gel becomes unstable to microphase separation upon lowering the temperature in the gel phase. Whereas the length scale of microphase separation is given by the mesh size, at least close to the transition, the emergent microstructure depends on the composition and compressibility of the melt. Hexagonal structures, as well as lamellae or random structures with a unique wavelength, can be energetically favorable.Comment: 19 pages, 10 figures. Submitted to the Journal of Chemical Physics (http://jcp.aip.org