Identification and Characterization of MicroRNAs in Asiatic Cotton (Gossypium arboreum L.)

To date, no miRNAs have been identified in the important diploid cotton species although there are several reports on miRNAs in upland cotton. In this study, we identified 73 miRNAs, belonging to 49 families, from Asiatic cotton using a well-developed comparative genome-based homologue search. Several of the predicted miRNAs were validated using quantitative real time PCR (qRT-PCR). The length of miRNAs varied from 18 to 22 nt with an average of 20 nt. The length of miRNA precursors also varied from 46 to 684 nt with an average of 138 ±120 nt. For a majority of Asiatic cotton miRNAs, there is only one member per family; however, multiple members were identified for miRNA 156, 414, 837, 838, 1044, 1533, 2902, 2868, 5021 and 5142 families. Nucleotides A and U were dominant, accounted for 62.95%, in the Asiatic cotton pre-miRNAs. The Asiatic cotton pre-miRNAs had high negative minimal folding free energy (MFE) and adjusted MFE (AMFE) and high MFE index (MFEI). Many miRNAs identified in Asiatic cotton suggest that miRNAs also play a similar regulatory mechanism in diploid cotton

Involvement of ABA in flower induction of Pharbitis nil

Flowering of plants is controlled by hormones among which both stimulators and inhibitors are present. The role of abscisic acid (ABA) in flower induction of the short day plant Pharbitis nil was shown in our experiments through exogenous applications and endogenous level determination of the hormone in cotyledons of seedlings grown under special light conditions. The application of ABA to cotyledons or shoot apices during the first half of a 24-h long inductive night inhibits flowering. The same compound applied towards the end of or after a 14-h long subinductive night increases the number of flower buds produced by these plants. Exposing P. nil seedlings at the beginning of a 24-h long inductive night to far red light (FR) decreases the level of endogenous abscisic acid in cotyledons and leads to flower inhibition. However, a pulse of red light (R) reversing the inhibitory effect of far red light on the flowering of P. nil increases the ABA content. The results obtained confirm previous observations that ABA may play a dual and an important role in the regulation of floral bud formation in P. nil. The flowering occurs when the level of endogenous abscisic acid is low at the beginning and is high toward the end of the inductive night