Quantum phase transitions and quantum fidelity in free fermion graphs

In this paper we analyze the ground state phase diagram of a class of fermionic Hamiltonians by looking at the fidelity of ground states corresponding to slightly different Hamiltonian parameters. The Hamiltonians under investigation can be considered as the variable range generalization of the fermionic Hamiltonian obtained by the Jordan-Wigner transformation of the XY spin-chain in a transverse magnetic field. Under periodic boundary conditions, the matrices of the problem become circulant and the models are exactly solvable. Their free-ends counterparts are instead analyzed numerically. In particular, we focus on the long range model corresponding to a fully connected directed graph, providing asymptotic results in the thermodynamic limit, as well as the finite-size scaling analysis of the second order quantum phase transitions of the system. A strict relation between fidelity and single particle spectrum is demonstrated, and a peculiar gapful transition due to the long range nature of the coupling is found. A comparison between fidelity and another transition marker borrowed from quantum information i.e., single site entanglement, is also considered.Comment: 14 pages, 5 figure

Bipartite quantum states and random complex networks

We introduce a mapping between graphs and pure quantum bipartite states and show that the associated entanglement entropy conveys non-trivial information about the structure of the graph. Our primary goal is to investigate the family of random graphs known as complex networks. In the case of classical random graphs we derive an analytic expression for the averaged entanglement entropy $\bar S$ while for general complex networks we rely on numerics. For large number of nodes $n$ we find a scaling $\bar{S} \sim c \log n +g_e$ where both the prefactor $c$ and the sub-leading O(1) term $g_e$ are a characteristic of the different classes of complex networks. In particular, $g_e$ encodes topological features of the graphs and is named network topological entropy. Our results suggest that quantum entanglement may provide a powerful tool in the analysis of large complex networks with non-trivial topological properties.Comment: 4 pages, 3 figure

Coherent cavity networks with complete connectivity

When cavity photons couple to an optical fiber with a continuum of modes, they usually leak out within a finite amount of time. However, if the fiber is about one meter long and linked to a mirror, photons bounce back and forth within the fiber on a much faster time scale. As a result, {\em dynamical decoupling} prevents the cavity photons from entering the fiber. In this paper we use the simultaneous dynamical decoupling of a large number of distant cavities from the fiber modes of linear optics networks to mediate effective cavity-cavity interactions in a huge variety of configurations. Coherent cavity networks with complete connectivity can be created with potential applications in quantum computing and simulation of the complex interaction Hamiltonians of biological systems.Comment: revised version, improved analysis, 4 pages and 4 figure

Oxidative protein folding in the mitochondrial intermembrane space

Disulfide bond formation is a crucial step for oxidative folding and necessary for the acquisition of a protein's native conformation. Introduction of disulfide bonds is catalyzed in specialized subcellular compartments and requires the coordinated action of specific enzymes. The intermembrane space of mitochondria has recently been found to harbor a dedicated machinery that promotes the oxidative folding of substrate proteins by shuttling disulfide bonds. The newly identified oxidative pathway consists of the redox-regulated receptor Mia40 and the sulfhydryl oxidase Erv1. Proteins destined to the intermembrane space are trapped by a disulfide relay mechanism that involves an electron cascade from the incoming substrate to Mia40, then on to Erv1, and finally to molecular oxygen via cytochrome c. This thiol–disulfide exchange mechanism is essential for the import and for maintaining the structural stability of the incoming precursors. In this review we describe the mechanistic parameters that define the interaction and oxidation of the substrate proteins in light of the recent publications in the mitochondrial oxidative folding field

Ground-State Entanglement in Interacting Bosonic Graphs

We consider a collection of bosonic modes corresponding to the vertices of a graph $\Gamma.$ Quantum tunneling can occur only along the edges of $\Gamma$ and a local self-interaction term is present. Quantum entanglement of one vertex with respect the rest of the graph is analyzed in the ground-state of the system as a function of the tunneling amplitude $\tau.$ The topology of $\Gamma$ plays a major role in determining the tunneling amplitude $\tau^*$ which leads to the maximum ground-state entanglement. Whereas in most of the cases one finds the intuitively expected result $\tau^*=\infty$ we show that it there exists a family of graphs for which the optimal value of$\tau$ is pushed down to a finite value. We also show that, for complete graphs, our bi-partite entanglement provides useful insights in the analysis of the cross-over between insulating and superfluid ground statesComment: 5 pages (LaTeX) 5 eps figures include

Bures metric over thermal state manifolds and quantum criticality

We analyze the Bures metric over the manifold of thermal density matrices for systems featuring a zero temperature quantum phase transition. We show that the quantum critical region can be characterized in terms of the temperature scaling behavior of the metric tensor itself. Furthermore, the analysis of the metric tensor when both temperature and an external field are varied, allows to complement the understanding of the phase diagram including cross-over regions which are not characterized by any singular behavior. These results provide a further extension of the scope of the metric approach to quantum criticality.Comment: 9 pages, 4 figures, LaTeX problems fixed, references adde

Topology and energy transport in networks of interacting photosynthetic complexes

We address the role of topology in the energy transport process that occurs in networks of photosynthetic complexes. We take inspiration from light harvesting networks present in purple bacteria and simulate an incoherent dissipative energy transport process on more general and abstract networks, considering both regular structures (Cayley trees and hyperbranched fractals) and randomly-generated ones. We focus on the the two primary light harvesting complexes of purple bacteria, i.e., the LH1 and LH2, and we use network-theoretical centrality measures in order to select different LH1 arrangements. We show that different choices cause significant differences in the transport efficiencies, and that for regular networks centrality measures allow to identify arrangements that ensure transport efficiencies which are better than those obtained with a random disposition of the complexes. The optimal arrangements strongly depend on the dissipative nature of the dynamics and on the topological properties of the networks considered, and depending on the latter they are achieved by using global vs. local centrality measures. For randomly-generated networks a random arrangement of the complexes already provides efficient transport, and this suggests the process is strong with respect to limited amount of control in the structure design and to the disorder inherent in the construction of randomly-assembled structures. Finally, we compare the networks considered with the real biological networks and find that the latter have in general better performances, due to their higher connectivity, but the former with optimal arrangements can mimic the real networks' behaviour for a specific range of transport parameters. These results show that the use of network-theoretical concepts can be crucial for the characterization and design of efficient artificial energy transport networks.Comment: 14 pages, 16 figures, revised versio

Recommendations for Medical Education in Taiwan

The purpose of the new project presented in these pages is to offer an innovative approach to the study of the evolution of Coptic literature and, more specifically, to the corpus of writings produced in Egypt between the third and the late eleventh centuries, and expressed in the different dialects of the Coptic language. Its aim is to provide a new perspective on the cultural landscape of Christian Egypt by interweaving literary, historical, codicological and archaeological data, and producing a series of scholarly tools, till now unavailable, in a digital environment, including an archaeological Atlas of late antique and early mediaeval Coptic literature that will be searchable at different chronological, regional and thematic levels. As part of the above-described research activities and goals, a complete catalogue of the Coptic papyrus codices preserved in the Museo Egizio will be produced, as well as an edition of their titles and scribal subscriptions. The fragmentary codices in question, purchased in Egypt by Bernardino Drovetti in the 1820s, are a unique example of an entire well-preserved late antique institutional library – very likely originally belonging to the cathedral of This/Thinis – reflecting the literary tastes and dogmatic orientations before what can be defined as the ninth-century Coptic book revolution, which significantly changed bookmaking in Christian Egypt. The library of Thi(ni)s is a crucial and transitional instance in the history of Coptic books, which saw on the one hand the creation of new codicological and palaeographical features and on the other the progressive emergence of multiple-text codices