402 research outputs found
Distinguishing different stages of Parkinson's disease using composite index of speed and pen-pressure of sketching a spiral
The speed and pen-pressure while sketching a spiral are lower among Parkinson's disease (PD) patients with higher severity of the disease. However, the correlation between these features and the severity level (SL) of PD has been reported to be 0.4. There is a need for identifying parameters with a stronger correlation for considering this for accurate diagnosis of the disease. This study has proposed the use of the Composite Index of Speed and Pen-pressure (CISP) of sketching as a feature for analyzing the severity of PD. A total of 28 control group (CG) and 27 PD patients (total 55 participants) were recruited and assessed for Unified Parkinson's Disease Rating Scale (UPDRS). They drew guided Archimedean spiral on an A3 sheet. Speed, pen-pressure, and CISP were computed and analyzed to obtain their correlation with severity of the disease. The correlation of speed, pen-pressure, and CISP with the severity of PD was -0.415, -0.584, and -0.641, respectively. Mann-Whitney U test confirmed that CISP was suitable to distinguish between PD and CG, while non-parametric k-sample Kruskal-Wallis test confirmed that it was significantly different for PD SL-1 and PD SL-3. This shows that CISP during spiral sketching may be used to differentiate between CG and PD and between PD SL-1 and PD SL-3 but not SL-2
Development of health parameter model for risk prediction of CVD using SVM
Current methods of cardiovascular risk assessment are performed using health factors which are often based on the Framingham study. However, these methods have significant limitations due to their poor sensitivity and specificity. We have compared the parameters from the Framingham equation with linear regression analysis to establish the effect of training of the model for the local database. Support vector machine was used to determine the effectiveness of machine learning approach with the Framingham health parameters for risk assessment of cardiovascular disease (CVD). The result shows that while linear model trained using local database was an improvement on Framingham model, SVM based risk assessment model had high sensitivity and specificity of prediction of CVD. This indicates that using the health parameters identified using Framingham study, machine learning approach overcomes the low sensitivity and specificity of Framingham model
GM crops and gender issues
Correspondence in the December issue by Jonathan Gressel not only states that gender issues in rural settings have not been adequately addressed with respect to weed control biotech but also asserts that such technology can increase the quality of life of rural women in developing countries. Improved weed control is a labor-saving technology that can result in less employment in a labor surplus rural economy. Often in rural areas, wage income is the main source of income and an important determinant of the quality of life, particularly where employment opportunities are generally limited. Apart from soil preparation, planting and weeding, harvesting is also 'femanual' work that can generate more employment if yields are higher. Biotech can enhance the quality of life of women but only if the technology is associated with overall generation of rural employment
A new multicompartmental reaction-diffusion modeling method links transient membrane attachment of E. coli MinE to E-ring formation
Many important cellular processes are regulated by reaction-diffusion (RD) of molecules that takes place both in the cytoplasm and on the membrane. To model and analyze such multicompartmental processes, we developed a lattice-based Monte Carlo method, Spatiocyte that supports RD in volume and surface compartments at single molecule resolution. Stochasticity in RD and the excluded volume effect brought by intracellular molecular crowding, both of which can significantly affect RD and thus, cellular processes, are also supported. We verified the method by comparing simulation results of diffusion, irreversible and reversible reactions with the predicted analytical and best available numerical solutions. Moreover, to directly compare the localization patterns of molecules in fluorescence microscopy images with simulation, we devised a visualization method that mimics the microphotography process by showing the trajectory of simulated molecules averaged according to the camera exposure time. In the rod-shaped bacterium _Escherichia coli_, the division site is suppressed at the cell poles by periodic pole-to-pole oscillations of the Min proteins (MinC, MinD and MinE) arising from carefully orchestrated RD in both cytoplasm and membrane compartments. Using Spatiocyte we could model and reproduce the _in vivo_ MinDE localization dynamics by accounting for the established properties of MinE. Our results suggest that the MinE ring, which is essential in preventing polar septation, is largely composed of MinE that is transiently attached to the membrane independently after recruited by MinD. Overall, Spatiocyte allows simulation and visualization of complex spatial and reaction-diffusion mediated cellular processes in volumes and surfaces. As we showed, it can potentially provide mechanistic insights otherwise difficult to obtain experimentally
The impact of Bt cotton on poor households in rural India
The impact of genetically modified (GM) crops on the poor in developing countries is still the subject of controversy. While previous studies have examined direct productivity effects of Bacillus thuringiensis (Bt) cotton and other GM crops, little is known about wider socioeconomic outcomes. We use a microeconomic modelling approach and comprehensive survey data from India to analyse welfare and distribution effects in a typical village economy. Bt cotton adoption increases returns to labour, especially for hired female workers. Likewise, aggregate household incomes rise, including for poor and vulnerable farmers. Hence, Bt cotton contributes to poverty reduction and rural development
A Review of Materials used for Solid Oxide Fuel Cell
Abstract: To have the benefits of clean electric power with out engines, solar panels and wind farms which are familiar sources of alternative energy were a dream of the engineers and environmentalists. Even though they are effective sources of electric energy, there are problems with the stability of their energy sources at all times. Extracting electricity from a device called as "solid electrolyte fuel cell" were demonstrated by the scientists and since then there has been an intense research and development effort on alternative energy technology known as fuel cells. Now, as energy issues are at the forefront of current events, fuel cell technology is ripening and on the verge of being ready for large scale commercial implementation. This paper briefly reviews materials currently used in the solid oxide fuel cells ,merits and demerits of the various materials used in SOFC such as Electrolytes, Anode, Cathode and Interconnects are discussed and in addition various fabrication processes and structural supports are reviewed. Materials are to be developed for all components of SOFC, in order to reduce operating temperature and overall cost
Recognition of Facial Movements and Hand Gestures Using Surface Electromyogram(sEMG) for HCI Based Applications
This research reports the recognition of facial move-ments during unvoiced speech and the identification of hand gestures using surface Electromyogram (sEMG). The paper proposes two different methods for identifying facial move-ments and hand gestures, which can be useful for provid-ing simple commands and control to computer, an important application of HCI. Experimental results demonstrate that the features of sEMG recordings are suitable for character-ising the muscle activation during unvoiced speech and sub-tle gestures. The scatter plots from the two methods demon-strate the separation of data for each corresponding vowel and each hand gesture. The results indicate that there is small inter-experimental variation but there are large inter-subject variations. This inter-subject variation may be at-tributable to anatomical differences and different speed and style of speaking for the different subjects. The proposed system provides better results when is trained and tested by individual user. The possible applications of this research include giving simple commands to computer for disabled, developing prosthetic hands, use of classifying sEMG for HCI based systems. 1
Structure and functional characterization of pyruvate decarboxylase from Gluconacetobacter diazotrophicus
BACKGROUND: Bacterial pyruvate decarboxylases (PDC) are rare. Their role in ethanol production and in bacterially
mediated ethanologenic processes has, however, ensured a continued and growing interest. PDCs from Zymomonas
mobilis (ZmPDC), Zymobacter palmae (ZpPDC) and Sarcina ventriculi (SvPDC) have been characterized and ZmPDC
has been produced successfully in a range of heterologous hosts. PDCs from the Acetobacteraceae and their role in
metabolism have not been characterized to the same extent. Examples include Gluconobacter oxydans (GoPDC),
G. diazotrophicus (GdPDC) and Acetobacter pasteutrianus (ApPDC). All of these organisms are of commercial importance.
RESULTS: This study reports the kinetic characterization and the crystal structure of a PDC from Gluconacetobacter
diazotrophicus (GdPDC). Enzyme kinetic analysis indicates a high affinity for pyruvate (KM 0.06 mM at pH 5), high
catalytic efficiencies, pHopt of 5.5 and Topt at 45 degrees C. The enzyme is not thermostable (T of
18 minutes at 60 degrees C) and the calculated number of bonds between monomers and dimers do not give clear indications
for the relatively lower thermostability compared to other PDCs. The structure is highly similar to those described for Z.
mobilis (ZmPDC) and A. pasteurianus PDC (ApPDC) with a rmsd value of 0.57 A for C? when comparing GdPDC to that
of ApPDC. Indole-3-pyruvate does not serve as a substrate for the enzyme. Structural differences occur in two loci,
involving the regions Thr341 to Thr352 and Asn499 to Asp503.
CONCLUSIONS: This is the first study of the PDC from G. diazotrophicus (PAL5) and lays the groundwork for future
research into its role in this endosymbiont. The crystal structure of GdPDC indicates the enzyme to be evolutionarily
closely related to homologues from Z. mobilis and A. pasteurianus and suggests strong selective pressure to keep the
enzyme characteristics in a narrow range. The pH optimum together with reduced thermostability likely reflect the
host organisms niche and conditions under which these properties have been naturally selected for. The lack of activity
on indole-3-pyruvate excludes this decarboxylase as the enzyme responsible for indole acetic acid production in
G. diazotrophicus.IS
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