6 research outputs found
Time Series Forecasting of the Development of the Insurance Industry in Poland
This work investigates the development of the insurance industry in Poland over the last twelve years (2001 - 2012) and makes forecasts of this development for all quarters of the year 2013. We consider Gross Written Premiums (GWP) as the best indicator showing the size of the insurance industry. Our aim is to discover relations between GWP and other time series regarding Polish economy: profitability ratio of technical activity for the entire insurance industry, Gross Domestic Product, inflation and consumer confidence indicators. Firstly, we conduct univariate analysis of all the six time series, find trends and seasonal effects, model the residuals, as well as apply SARIMA models. For each series the corresponding forecasts are presented. In the second part we conduct multivariate time series analysis, in particular we model our data with VAR and look for Granger causalities
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Validation of statistical methods used in task fMRI studies
Functional Magnetic Resonance Imaging (fMRI) is a non-invasive tool used to investigate
brain function. The processing of fMRI data consists of multiple steps and the
final results often depend greatly on the specific choice of options used: for example, head
motion correction, slice timing correction, registration to common space, pre-whitening,
hemodynamic response function modelling and multiple comparison correction. As most
of these methods were introduced when fMRI was in its infancy, and were initially validated
only for small datasets, it is questionable whether the current default methods used
in the popular analysis packages are optimal. Despite the huge popularity of fMRI, there
have been few studies validating statistical methods. This thesis presents a validation
of statistical methods used in task fMRI studies which are related to pre-whitening and
to hemodynamic response function modelling. It considers fMRI used with the blood
oxygenation level dependent (BOLD) contrast.
Firstly, I compared the most frequently used fMRI analysis packages: AFNI, FSL and
SPM, with regard to temporal autocorrelation modelling, often known as pre-whitening. I
employed eleven datasets containing 980 scans corresponding to different fMRI protocols
and subject populations. Though autocorrelation modelling in AFNI was not perfect,
its performance was much higher than the performance of autocorrelation modelling in
FSL and SPM. The residual autocorrelated noise in FSL and SPM led to heavily confounded
first level results, particularly for low-frequency experimental designs. My results
show superior performance of SPM’s alternative pre-whitening: FAST, over SPM’s default
algorithm. The reliability of task fMRI studies would increase with more accurate autocorrelation
modelling. Furthermore, reliability could increase if the packages provided
diagnostic plots. This way the investigator would be aware of pre-whitening problems.
Next, I compared - in terms of specificity-sensitivity trade-offs - a number of hemodynamic
response function models which are available in AFNI, FSL and SPM. Again,
I used different datasets to represent different fMRI protocols and different experimental
designs: altogether scans of 772 subjects from five experiments. In contrast to previous
studies, I used real data rather than simulations, investigated methods from more than
one software package, and employed scans of many subjects. Among other factors, I found
that the use of the temporal and dispersion derivatives led to large sensitivity increases
compared to the use of the canonical model, but only when the experimental design was
event-related and when the statistical inference was based on an F-test which tested the
variance explained by canonical function together with the derivatives rather than a t-test
which tested the variance explained by the canonical function only. This was the case
both for single subject and for group level analyses.
Finally, I investigated the effect of ageing on the BOLD signal. For this, I used
the Cambridge Centre for Ageing and Neuroscience (CamCAN) data of 641 subjects
between 18 and 88 years old. I investigated how the shape of the hemodynamic response
function changes with age and whether it is on average similar to the canonical function.
The CamCAN task fMRI data enabled the estimation of the hemodynamic response
function in the auditory, visual and motor regions. I used the biophysical balloon model
to investigate whether values of BOLD-derived physiological parameters vary with age and
whether these variations can explain the difference of the hemodynamic response function
with age. CamCAN Magnetoencephalography (MEG) data enabled a correlation of the
results with neural delay estimates. The hemodynamic response function was found to
substantially vary with age, with observed response delays in all considered regions. The
estimated balloon model parameters were found to vary with age too. A robustness
analysis of the SPM’s balloon model revealed serious problems with the current SPM’s
balloon model estimation procedure.
Overall, this thesis presents novel validations of a number of popular statistical methods
used in task fMRI studies. I identified several relevant problems related to prewhitening
and hemodynamic response function modelling. Importantly, in this thesis I
address ways of dealing with such problems so that sensitivity and specificity in task fMRI
studies can be improved.Cambridge Trust, Mateusz B Grabowski Fund, Cambridge Philosophical Societ
Accurate autocorrelation modeling substantially improves fMRI reliability.
Given the recent controversies in some neuroimaging statistical methods, we compare the most frequently used functional Magnetic Resonance Imaging (fMRI) analysis packages: AFNI, FSL and SPM, with regard to temporal autocorrelation modeling. This process, sometimes known as pre-whitening, is conducted in virtually all task fMRI studies. Here, we employ eleven datasets containing 980 scans corresponding to different fMRI protocols and subject populations. We found that autocorrelation modeling in AFNI, although imperfect, performed much better than the autocorrelation modeling of FSL and SPM. The presence of residual autocorrelated noise in FSL and SPM leads to heavily confounded first level results, particularly for low-frequency experimental designs. SPM's alternative pre-whitening method, FAST, performed better than SPM's default. The reliability of task fMRI studies could be improved with more accurate autocorrelation modeling. We recommend that fMRI analysis packages provide diagnostic plots to make users aware of any pre-whitening problems