1,444 research outputs found
A critical review on sustainable biochar system through gasification: energy and environmental applications
This review lays great emphasis on production and characteristics of biochar through gasification. Specifically, the physicochemical properties and yield of biochar through the diverse gasification conditions associated with various types of biomass were extensively evaluated. In addition, potential application scenarios of biochar through gasification were explored and their environmental implications were discussed. To qualitatively evaluate biochar sustainability through the gasification process, all gasification products (i.e., syngas and biochar) were evaluated via life cycle assessment (LCA). A concept of balancing syngas and biochar production for an economically and environmentally feasible gasification system was proposed and relevant challenges and solutions were suggested in this review
An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases
<p>Abstract</p> <p>Background</p> <p>Studies on the relationship between disease and genetic variations such as single nucleotide polymorphisms (SNPs) are important. Genetic variations can cause disease by influencing important biological regulation processes. Despite the needs for analyzing SNP and disease correlation, most existing databases provide information only on functional variants at specific locations on the genome, or deal with only a few genes associated with disease. There is no combined resource to widely support gene-, SNP-, and disease-related information, and to capture relationships among such data. Therefore, we developed an integrated database-pipeline system for studying SNPs and diseases.</p> <p>Results</p> <p>To implement the pipeline system for the integrated database, we first unified complicated and redundant disease terms and gene names using the Unified Medical Language System (UMLS) for classification and noun modification, and the HUGO Gene Nomenclature Committee (HGNC) and NCBI gene databases. Next, we collected and integrated representative databases for three categories of information. For genes and proteins, we examined the NCBI mRNA, UniProt, UCSC Table Track and MitoDat databases. For genetic variants we used the dbSNP, JSNP, ALFRED, and HGVbase databases. For disease, we employed OMIM, GAD, and HGMD databases. The database-pipeline system provides a disease thesaurus, including genes and SNPs associated with disease. The search results for these categories are available on the web page <url>http://diseasome.kobic.re.kr/</url>, and a genome browser is also available to highlight findings, as well as to permit the convenient review of potentially deleterious SNPs among genes strongly associated with specific diseases and clinical phenotypes.</p> <p>Conclusion</p> <p>Our system is designed to capture the relationships between SNPs associated with disease and disease-causing genes. The integrated database-pipeline provides a list of candidate genes and SNP markers for evaluation in both epidemiological and molecular biological approaches to diseases-gene association studies. Furthermore, researchers then can decide semi-automatically the data set for association studies while considering the relationships between genetic variation and diseases. The database can also be economical for disease-association studies, as well as to facilitate an understanding of the processes which cause disease. Currently, the database contains 14,674 SNP records and 109,715 gene records associated with human diseases and it is updated at regular intervals.</p
Effect of biochars pyrolyzed in N2 and CO2, and feedstock on microbial community in metal(loid)s contaminated soils
Little is known about the effects of applying amendments on soil for immobilizing metal(loid)s on the soil microbial community. Alterations in the microbial community were examined after incubation of treated contaminated soils. One soil was contaminated with Pb and As, a second soil with Cd and Zn. Red pepper stalk (RPS) and biochars produced from RPS in either N2 atmosphere (RPSN) or CO2 atmosphere (RPSC) were applied at a rate of 2.5% to the two soils and incubated for 30 days. Bacterial communities of control and treated soils were characterized by sequencing 16S rRNA genes using the Illumina MiSeq sequencing. In both soils, bacterial richness increased in the amended soils, though somewhat differently between the treatments. Evenness values decreased significantly, and the final overall diversities were reduced. The neutralization of pH, reduced available concentrations of Pb or Cd, and supplementation of available carbon and surface area could be possible factors affecting the community changes. Biochar amendments caused the soil bacterial communities to become more similar than those in the not amended soils. The bacterial community structures at the phylum and genus levels showed that amendment addition might restore the normal bacterial community of soils, and cause soil bacterial communities in contaminated soils to normalize and stabilize
Towards practical application of gasification: a critical review from syngas and biochar perspectives
Syngas and biochar production are mainly influenced by temperature,
feedstock properties, gasifying agent, pressure, and
the mass ratio between gasifying agent and feedstock with
temperature being the most significant factor. Increasing temperature
generally promotes syngas production while suppressing
biochar production. The selection of gasifiers (fixed
bed, fluidized bed, and entrained flow) is highly dependent
on scale requirement (e.g., volume of feedstock and energy
demand), feedstock characteristics (e.g., moisture and ash content),
and the quality of syngas and biochar. Updraft fixed
bed gasifiers are suitable for the feedstocks with a moisture
content up to 50 wt.%. High ash feedstocks such as Indian
coal, dried sewage sludge, and municipal solid waste that are
not suitable for fixed bed gasifiers, have been successfully
gasified in bubbling fluidized bed reactors. Woody biomass is
not suitable for entrained flow gasifiers unless specialized
feeding methods are employed such as wood torrefaction and
grinding followed by the existing feeding methods for pulverized
coals, biomass-oil biochar slurry preparation followed by
pumping, wood or torrefied wood slurry preparation followed
by pumping, etc. Syngas and biochar can potentially be contaminated
by NH3, H2S, and tar, which can be removed using
catalysts (e.g., Ni-based), metal oxides-based sorbents, and
thermal and catalytic cracking methods. Existing syngas and
biochar upgrading methods suffered from various problems
such as economic infeasibility, limited productivity, and fouling,
and future syngas and biochar upgrading methods should
be aimed to have the features of reliability, security, affordability,
and sustainability, towards the practical, large-scale production
of syngas- and biochar-based products. One potential
solution is to develop integrated systems by combining biochar
upgrading and application with syngas upgrading, which
warrants an integrated perspective based on both life cycle
assessment and economic analysis
One-Round Protocol for Two-Party Verifier-Based Password-Authenticated Key Exchange
Abstract. Password-authenticated key exchange (PAKE) for two-party allows a client and a server communicating over a public network to share a session key using a human-memorable password only. PAKE protocols can be served as basic building blocks for constructing secure, complex, and higher-level protocols which were initially built upon the Transport Layer Security (TLS) protocol. In this paper, we propose a provablysecure verifier-based PAKE protocol well suited with the TLS protocol which requires only a single round. The protocol is secure against attacks using compromised server's password file and known-key attacks, and provides forward secrecy, which is analyzed in the ideal hash model. This scheme matches the most efficient verifier-based PAKE protocol among those found in the literature. It is the first provably-secure one-round protocol for verifier-based PAKE in the two-party setting
Inhibition of hepatic stellate cells by bone marrow-derived mesenchymal stem cells in hepatic fibrosis
Background/AimsTherapies involving bone-marrow-derived mesenchymal stem cells (BM-MSCs) have considerable potential in the management of hepatic disease. BM-MSCs have been investigated in regenerative medicine due to their ability to secrete various growth factors and cytokines that regress hepatic fibrosis and enhance hepatocyte functionality. The aim of this study was to determine the antifibrosis effect of BM-MSCs on activated hepatic stellate cells (HSCs) and the mechanism underlying how BM-MSCs modulate the function of activated HSCs.MethodsWe used HSCs in both direct and indirect co-culture systems with BM-MSCs to evaluate the antifibrosis effect of BM-MSCs. The cell viability and apoptosis were evaluated by a direct co-culture system of activated HSCs with BM-MSCs. The activations of both HSCs alone and HSCs with BM-MSCs in the direct co-culture system were observed by immunocytochemistry for alpha-smooth muscle actin (α-SMA). The levels of growth factors and cytokines were evaluated by an indirect co-culture system of activated HSCs with BM-MSCs.ResultsThe BM-MSCs in the direct co-culture system significantly decreased the production of α-SMA and the viability of activated HSCs, whereas they induced the apoptosis of activated HSCs. The BM-MSCs in the indirect co-culture system decreased the production of transforming growth factor-β1 and interleukin (IL)-6, whereas they increased the production of hepatocyte growth factor and IL-10. These results confirmed that the juxtacrine and paracrine effects of BM-MSCs can inhibit the proliferative, fibrogenic function of activated HSCs and have the potential to reverse the fibrotic process by inhibiting the production of α-SMA and inducing the apoptosis of HSCs.ConclusionsThese results have demonstrated that BM-MSCs may exert an antifibrosis effect by modulating the function of activated HSCs
Computer-aided detection (CAD) system for breast MRI in assessment of local tumor extent, nodal status, and multifocality of invasive breast cancers: preliminary study
Understanding the paradigm shift to computational social science in the presence of big data
National Research Foundation (NRF) Singapore under International Research Centre @ Singapore Funding Initiativ
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