Botulinum toxin injections as a method for chemically denervating skeletal muscle to test functional hypotheses: a pilot study in Lepomis cyanellus

In this study, we demonstrate that botulinum toxin can be used to chemically denervate muscles to test functional hypotheses. We injected research-grade type A botulinum toxin complex into pectoral fin abductors (abductor superficialis) of green sunfish (Lepomis cyanellus) to determine whether chemical denervation would eliminate the ability of a particular muscle to contribute to overall pectoral fin movements. Reduction of target muscle activity occurred within 8 d of the injection, and paralysis was confirmed using electromyography. No paralysis was seen in the adjacent muscles (abductor profundus) or in positive controls (saline injections). Paralysis occurred more slowly and at lower doses than previously documented for mammals. However, botulinum toxin complex (500 kDa) was used here, whereas previous studies have used purified toxin (150 kDa). Therefore, differences in physiological responses between fish and mammals cannot yet be distinguished from differences caused by the toxin type. However, we note that the toxin complex is less likely to diffuse across muscle fascia (because it is large), which should minimize paralytic effects on adjacent muscles. We suggest that botulinum toxin holds great promise as a chemical denervation agent in functional studies of animal locomotion and feeding behaviors

Evaluating femtosecond laser ablation of graphene on SiO<inf>2</inf>/Si substrate

We demonstrate a uniform single layer micropattern of graphene on 300 nm thick SiO2 on a Si substrate using a 1030 nm, 280 fs laser. The cutting process was conducted in air, the pattern defined through the motion of a high-precision translation stage. Approximately 1.6 μm wide graphene microchannels were cut with uniform widths and well defined edges. The ablation threshold of graphene was determined to be 66–120 mJ/cm2, at which the selective removal of graphene was achieved without damage to the SiO2/Si substrate. Scanning electron microscopy images revealed high quality cuts (standard deviation 40 nm) with little damage or re-deposition. Raman maps showed no discernible laser induced damage in the graphene within the ablation zone. Atomic force microscopy revealed an edge step height ranging from less than 2 to 10 nm, suggesting little removal of SiO2 and no damage to the silicon (the central path showed sub ablation threshold swelling). The effect of the ultrafast laser on the surface potential at the cut edge has been measured and it showed a distinguishable boundary.This work was supported by The Engineering and Physical Sciences Research Council (EPSRC) and National University of Defence Technology (NUDT). The authors also thank Cambridge Graphene Centre (CGC).This is the final version of the article. It first appeared from the American Institute of Physics via http://dx.doi.org/10.2351/1.494451

Radiative corrections for (e,e′p) reactions at GeV energies

A general framework for applying radiative corrections to (e,e′p) coincidence reactions at GeV energies is presented, with special emphasis to higher-order bremsstrahlung effects, radiation from the scattered hadron, and the validity of peaking approximations. The sensitivity to the assumptions made in practically applying radiative corrections to (e,e′p) data is extensively discussed. The general framework is tested against experimental data of the 1H(e,e′p) reaction at momentum transfer values larger than 1.0 (GeV/c)^2, where radiative processes become a dominant source of uncertainty. The formulas presented here can easily be modified for any other electron-induced coincidence reaction

Eigenvalue initialisation and regularisation for Koopman autoencoders

Regularising the parameter matrices of neural networks is ubiquitous in training deep models. Typical regularisation approaches suggest initialising weights using small random values, and to penalise weights to promote sparsity. However, these widely used techniques may be less effective in certain scenarios. Here, we study the Koopman autoencoder model which includes an encoder, a Koopman operator layer, and a decoder. These models have been designed and dedicated to tackle physics-related problems with interpretable dynamics and an ability to incorporate physics-related constraints. However, the majority of existing work employs standard regularisation practices. In our work, we take a step toward augmenting Koopman autoencoders with initialisation and penalty schemes tailored for physics-related settings. Specifically, we propose the "eigeninit" initialisation scheme that samples initial Koopman operators from specific eigenvalue distributions. In addition, we suggest the "eigenloss" penalty scheme that penalises the eigenvalues of the Koopman operator during training. We demonstrate the utility of these schemes on two synthetic data sets: a driven pendulum and flow past a cylinder; and two real-world problems: ocean surface temperatures and cyclone wind fields. We find on these datasets that eigenloss and eigeninit improves the convergence rate by up to a factor of 5, and that they reduce the cumulative long-term prediction error by up to a factor of 3. Such a finding points to the utility of incorporating similar schemes as an inductive bias in other physics-related deep learning approaches.Comment: 18 page

Momentum Transfer Dependence of Nuclear Transparency from the Quasielastic ^(12)C(e, e'p) Reaction

The cross section for quasielastic ^(12)C(e,e’p) scattering has been measured at momentum transfer Q^2=1, 3, 5, and 6.8 (GeV/c)^2. The results are consistent with scattering from a single nucleon as the dominant process. The nuclear transparency is obtained and compared with theoretical calculations that incorporate color transparency effects. No significant rise of the transparency with Q^2 is observed

What is the topology of a Schwarzschild black hole?

We investigate the topology of Schwarzschild's black hole through the immersion of this space-time in spaces of higher dimension. Through the immersions of Kasner and Fronsdal we calculate the extension of the Schwarzschild's black hole.Comment: 7 pages. arXiv admin note: substantial text overlap with arXiv:1102.446

Perfect fluids from high power sigma-models

Certain solutions of a sextic sigma-model Lagrangian reminiscent of Skyrme model correspond to perfect fluids with stiff matter equation of state. We analyse from a differential geometric perspective this correspondence extended to general barotropic fluids.Comment: 17 pages. Version published in IJGMMP 8 (2011). Added Example 3.4 and 1 referenc

Border Terriers under primary veterinary care in England: demography and disorders

The Border Terrier is a working terrier type that is generally considered to be a relatively healthy and hardy breed. This study aimed to characterise the demography and common disorders of Border Terriers receiving veterinary care in England using de-identified electronic patient record data within the VetCompass™ Programme

Assessing the image quality of pelvic MR images acquired with a flat couch for radiotherapy treatment planning

OBJECTIVES: To improve the integration of MRI with radiotherapy treatment planning, our department fabricated a flat couch top for our MR scanner. Setting up using this couch top meant that the patients were physically higher up in the scanner and, posteriorly, a gap was introduced between the patient and radiofrequency coil. METHODS: Phantom measurements were performed to assess the quantitative impact on image quality. A phantom was set up with and without the flat couch insert in place, and measurements of image uniformity and signal to noise were made. To assess clinical impact, six patients with pelvic cancer were recruited and scanned on both couch types. The image quality of pairs of scans was assessed by two consultant radiologists. RESULTS: The use of the flat couch insert led to a drop in image signal to noise of approximately 14%. Uniformity in the anteroposterior direction was affected the most, with little change in right-to-left and feet-to-head directions. All six patients were successfully scanned on the flat couch, although one patient had to be positioned with their arms by their sides. The image quality scores showed no statistically significant change between scans with and without the flat couch in place. CONCLUSION: Although the quantitative performance of the coil is affected by the integration of a flat couch top, there is no discernible deterioration of diagnostic image quality, as assessed by two consultant radiologists. Although the flat couch insert moved patients higher in the bore of the scanner, all patients in the study were successfully scanned

XMM-Newton observations of the Narrow-Line Seyfert 1 galaxy Mrk 335 in an historical low X-ray flux state

We report the discovery of strong soft X-ray emission lines and a hard continuum above 2 keV in the Narrow-Line Seyfert 1 galaxy Mrk 335 during an extremely low X-ray flux state. Mrk 335 was observed for 22 ks by XMM-Newton in July 2007 as a Target of Opportunity to examine it in its X-ray low-flux state, which was discovered with Swift. Long-term light curves suggest that this is the lowest flux state this AGN has ever been seen in. However, Mrk 335 is still sufficiently bright that its X-ray properties can be studied in detail. The X-ray continuum spectrum is very complex and requires several components to model. Statistically, partial covering and blurred reflection models work well. We confirm the presence of a strong narrow Fe line at 6.4 keV. High-resolution spectroscopy with the XMM-RGS reveals strong, soft X-ray emission lines not detected in previous, higher signal-to-noise, XMM-Newton observations, such as: highly ionized Fe lines, O VII, Ne IX and Mg XI lines. The optical/UV fluxes are similar to those previously measured with Swift. Optical spectroscopy taken in 2007 September do not show any changes to optical spectra obtained 8 years earlier.Comment: Accepted for publication in ApJ; 26 pages, 10 figues, in press, ApJ 681 (July 01, 2008); Updated version with corrections made by the edito