Multiplication of Annatto (Bixa orellana L.) using cotyledons and leaf explants

Annatto (Bixa orellana L.) is an important natural dye yielding plant. To improve theregeneration capacity of annatto, the effects of explants size, plant growth regulators, lightregime and leaf position were evaluated using cotyledons and leaf explants derived fromseedlings. Explants having entire lamina with petiole showed maximum response. Thecotyledonary explants produced highest regeneration frequency (78.1%) and maximumnumber of shoots (12.4) on Murashige and Skoog medium supplemented with 20 μM benzyladenine (BA). Leaf explants on MS medium containing 20 μM BA gave 67% regenerationfrequency and 11.3 new shoots per explant. A photoperiod of 16/8 h (light/dark) was foundto be superior to continuous dark or light. Position of leaf on the seedling had significantrole in organogenic response and is found decreasing from the base to shoot apex. Theregenerated shoots were rooted on MS medium supplemented with 10 μM IBA. The rootedplantlets were transferred initially in the growth chamber and then moved to a green house.The present protocol can be utilized for the mass multiplication and also for effective genetictransformation aimed at the improvement of annatto

Antigenotoxic potential of the aqueous basidiocarp extracts of Calocybe indica

Calocybe indica, commonly known as the milky white mushroom, is an edible mushroom native to India. The antigenotoxic potential of the aqueous basidiocarp extract (25 g/L and 50 g/L) of C. indica was investigated using the Allium cepa test system. Meristematic cells of root tips treated with 100% Coca-Cola served as a positive control. A significant reduction in the mitotic index (7.83 ± 0.60) was observed in the positive control (100% Coca-Cola) compared to the negative control. The highest percentage (65.25 ± 4.58) of chromosomal abnormalities was observed in the positive control. Chromosomal abnormalities were significantly reduced in root tip cells treated with Coca-Cola followed by treatment with basidiocarp extracts such as 25 g/L and 50 g/L (30.32 ± 4.44 and 14.20 ± 2.41, respectively). Coca-Cola induced chromosomal abnormalities were reduced by treatment with basidiocarp extracts, demonstrating the antimutagenic potential of C. indica. The present study indicates that the aqueous basidiocarp extracts of C. indica have anti-genotoxic effects. The clastogenic abnormalities caused by Coca-Cola are competently restored in the root meristem cells of A. cepa treated with the extract

Metagenomic deep sequencing of aqueous fluid detects intraocular lymphomas.

IntroductionCurrently, the detection of pathogens or mutations associated with intraocular lymphomas heavily relies on prespecified, directed PCRs. With metagenomic deep sequencing (MDS), an unbiased high-throughput sequencing approach, all pathogens as well as all mutations present in the host's genome can be detected in the same small amount of ocular fluid.MethodsIn this cross-sectional case series, aqueous fluid samples from two patients were submitted to MDS to identify pathogens as well as common and rare cancer mutations.ResultsMDS of aqueous fluid from the first patient with vitreal lymphoma revealed the presence of both Epstein-Barr virus (HHV-4/EBV) and human herpes virus 8 (HHV-8) RNA. Aqueous fluid from the second patient with intraocular B-cell lymphoma demonstrated a less common mutation in the MYD88 gene associated with B-cell lymphoma.ConclusionMDS detects pathogens that, in some instances, may drive the development of intraocular lymphomas. Moreover, MDS is able to identify both common and rare mutations associated with lymphomas

Seasonal Pattern of Acute Myocardial Infarction in the National Registry of Myocardial Infarction

ObjectivesThe purpose of this study was to determine whether the rate of hospital admission for acute myocardial infarction (AMI) varies seasonally in a large, prospective U.S. registry.BackgroundIdentification of specific patterns in the timing of the onset of AMI is of importance because it implies that there are triggers external to the atherosclerotic plaque. Using death certificate data, most investigators have noted a seasonal pattern to the death rate from AMI. However, it is unclear whether this observation is due to variation in the prevalence of AMI or to other factors that may alter the likelihood of a fatal outcome.MethodsWe examined the seasonal mean number of cases of AMI (adjusted for the length of days in each season) that were submitted to the National Registry of Myocardial Infarction (NRMI) by 138 high volume core hospitals over a 3-year period (December 21,1990 through December 20,1993) during which the number of hospitals participating in the Registry was stable. Data were analyzed using general linear modeling and analysis of variance.ResultsHigh volume core hospitals reported 83,541 cases of AMI to the Registry during the study period. Approximately 10% more such cases were entered into the Registry in winter or spring than in summer (p < 0.05). The same trends were seen in both northern and southern states, men and women, patients <70 versus ≥70 years of age and those with Q wave versus non-Q wave AMI.ConclusionsWe conclude that there is a seasonal pattern to the reporting rate of cases of AMI in the NRMI. This observation further supports the hypothesis that acute cardiovascular events may be triggered by events that are external to the atherosclerotic plaque

(E)-2-(4-Benz­yloxy-2-hy­droxy­benzyl­idene)-N-phenyl­hydrazinecarbothio­amide

The title compound, C21H19N3O2S, exists in the thione form. The configuration about the C=N bond is E. The hydrazinecarbothio­amide unit adopts an almost planar arrangement, with maximum deviations of 0.016 (3) and −0.016 (2) Å for the two thio­urea N atoms. An intra­molecular O—H⋯N hydrogen bond occurs. Weak inter­molecular N—H⋯S, C—H⋯O and C—H⋯π inter­actions are observed in the crystal structure

Unbiased Metagenomic Sequencing for Pediatric Meningitis in Bangladesh Reveals Neuroinvasive Chikungunya Virus Outbreak and Other Unrealized Pathogens.

The burden of meningitis in low-and-middle-income countries remains significant, but the infectious causes remain largely unknown, impeding institution of evidence-based treatment and prevention decisions. We conducted a validation and application study of unbiased metagenomic next-generation sequencing (mNGS) to elucidate etiologies of meningitis in Bangladesh. This RNA mNGS study was performed on cerebrospinal fluid (CSF) specimens from patients admitted in the largest pediatric hospital, a World Health Organization sentinel site, with known neurologic infections (n = 36), with idiopathic meningitis (n = 25), and with no infection (n = 30), and six environmental samples, collected between 2012 and 2018. We used the IDseq bioinformatics pipeline and machine learning to identify potentially pathogenic microbes, which we then confirmed orthogonally and followed up through phone/home visits. In samples with known etiology and without infections, there was 83% concordance between mNGS and conventional testing. In idiopathic cases, mNGS identified a potential bacterial or viral etiology in 40%. There were three instances of neuroinvasive Chikungunya virus (CHIKV), whose genomes were &gt;99% identical to each other and to a Bangladeshi strain only previously recognized to cause febrile illness in 2017. CHIKV-specific qPCR of all remaining stored CSF samples from children who presented with idiopathic meningitis in 2017 (n = 472) revealed 17 additional CHIKV meningitis cases, exposing an unrecognized meningitis outbreak. Orthogonal molecular confirmation, case-based clinical data, and patient follow-up substantiated the findings. Case-control CSF mNGS surveys can complement conventional diagnostic methods to identify etiologies of meningitis, conduct surveillance, and predict outbreaks. The improved patient- and population-level data can inform evidence-based policy decisions.IMPORTANCE Globally, there are an estimated 10.6 million cases of meningitis and 288,000 deaths every year, with the vast majority occurring in low- and middle-income countries. In addition, many survivors suffer from long-term neurological sequelae. Most laboratories assay only for common bacterial etiologies using culture and directed PCR, and the majority of meningitis cases lack microbiological diagnoses, impeding institution of evidence-based treatment and prevention strategies. We report here the results of a validation and application study of using unbiased metagenomic sequencing to determine etiologies of idiopathic (of unknown cause) cases. This included CSF from patients with known neurologic infections, with idiopathic meningitis, and without infection admitted in the largest children's hospital of Bangladesh and environmental samples. Using mNGS and machine learning, we identified and confirmed an etiology (viral or bacterial) in 40% of idiopathic cases. We detected three instances of Chikungunya virus (CHIKV) that were &gt;99% identical to each other and to a strain previously recognized to cause systemic illness only in 2017. CHIKV qPCR of all remaining stored 472 CSF samples from children who presented with idiopathic meningitis in 2017 at the same hospital uncovered an unrecognized CHIKV meningitis outbreak. CSF mNGS can complement conventional diagnostic methods to identify etiologies of meningitis, and the improved patient- and population-level data can inform better policy decisions