Correlated Quantum Memory: Manipulating Atomic Entanglement via Electromagnetically Induced Transparency

We propose a feasible scheme of quantum state storage and manipulation via electromagnetically induced transparency (EIT) in flexibly $united$ multi-ensembles of three-level atoms. For different atomic array configurations, one can properly steer the signal and the control lights to generate different forms of atomic entanglement within the framework of linear optics. These results shed new light on designing the versatile quantum memory devices by using, e.g., an atomic grid.Comment: 5 pages, 1 figur

Expressing a cytosolic pyruvate dehydrogenase complex to increase free fatty acid production in Saccharomyces cerevisiae

Background: Saccharomyces cerevisiae is being exploited as a cell factory to produce fatty acids and their derivatives as biofuels. Previous studies found that both precursor supply and fatty acid metabolism deregulation are essential for enhanced fatty acid synthesis. A bacterial pyruvate dehydrogenase (PDH) complex expressed in the yeast cytosol was reported to enable production of cytosolic acetyl-CoA with lower energy cost and no toxic intermediate. Results: Overexpression of the PDH complex significantly increased cell growth, ethanol consumption and reduced glycerol accumulation. Furthermore, to optimize the redox imbalance in production of fatty acids from glucose, two endogenous NAD+-dependent glycerol-3-phosphate dehydrogenases were deleted, and a heterologous NADP+-dependent glyceraldehyde-3-phosphate dehydrogenase was introduced. The best fatty acid producing strain PDH7 with engineering of precursor and co-factor metabolism could produce 840.5\ua0mg/L free fatty acids (FFAs) in shake flask, which was 83.2% higher than the control strain YJZ08. Profile analysis of free fatty acid suggested the cytosolic PDH complex mainly resulted in the increases of unsaturated fatty acids (C16:1 and C18:1). Conclusions: We demonstrated that cytosolic PDH pathway enabled more efficient acetyl-CoA provision with the lower ATP cost, and improved FFA production. Together with engineering of the redox factor rebalance, the cytosolic PDH pathway could achieve high level of FFA production at similar levels of other best acetyl-CoA producing pathways

Rewiring regulation on respiro-fermentative metabolism relieved Crabtree effects in Saccharomyces cerevisiae

The respiro-fermentative metabolism in the yeast Saccharomyces cerevisiae, also called the Crabtree effect, results in lower energy efficiency and biomass yield which can impact yields of chemicals to be produced using this cell factory. Although it can be engineered to become Crabtree negative, the slow growth and glucose consumption rate limit its industrial application. Here the Crabtree effect in yeast can be alleviated by engineering the transcription factor Mth1 involved in glucose signaling and a subunit of the RNA polymerase II mediator complex Med2. It was found that the mutant with the MTH1A81D&MED2*432Y allele could grow in glucose rich medium with a specific growth rate of 0.30 h−1, an ethanol yield of 0.10 g g−1, and a biomass yield of 0.21 g g−1, compared with a specific growth rate of 0.40 h−1, an ethanol yield of 0.46 g g−1, and a biomass yield of 0.11 g g−1 in the wild-type strain CEN.PK 113-5D. Transcriptome analysis revealed significant downregulation of the glycolytic process, as well as the upregulation of the TCA cycle and the electron transfer chain. Significant expression changes of several reporter transcription factors were also identified, which might explain the higher energy efficiencies in the engineered strain. We further demonstrated the potential of the engineered strain with the production of 3-hydroxypropionic acid at a titer of 2.04 g L−1, i.e., 5.4-fold higher than that of a reference strain, indicating that the alleviated glucose repression could enhance the supply of mitochondrial acetyl-CoA. These results suggested that the engineered strain could be used as an efficient cell factory for mitochondrial production of acetyl-CoA derived chemicals

Engineering yeast mitochondrial metabolism for 3-hydroxypropionate production

Background: With unique physiochemical environments in subcellular organelles, there has been growing interest in harnessing yeast organelles for bioproduct synthesis. Among these organelles, the yeast mitochondrion has been found to be an attractive compartment for production of terpenoids and branched-chain alcohols, which could be credited to the abundant supply of acetyl-CoA, ATP and cofactors. In this study we explored the mitochondrial potential for production of 3-hydroxypropionate (3-HP) and performed the cofactor engineering and flux control at the acetyl-CoA node to maximize 3-HP synthesis. Results: Metabolic modeling suggested that the mitochondrion serves as a more suitable compartment for 3-HP synthesis via the malonyl-CoA pathway than the cytosol, due to the opportunity to obtain a higher maximum yield and a lower oxygen consumption. With the malonyl-CoA reductase (MCR) targeted into the mitochondria, the 3-HP production increased to 0.27\ua0g/L compared with 0.09\ua0g/L with MCR expressed in the cytosol. With enhanced expression of dissected MCR enzymes, the titer reached to 4.42\ua0g/L, comparable to the highest titer achieved in the cytosol so far. Then, the mitochondrial NADPH supply was optimized by overexpressing POS5 and IDP1, which resulted in an increase in the 3-HP titer to 5.11\ua0g/L. Furthermore, with induced expression of an ACC1 mutant in the mitochondria, the final 3-HP production reached 6.16\ua0g/L in shake flask fermentations. The constructed strain was then evaluated in fed-batch fermentations, and produced 71.09\ua0g/L 3-HP with a productivity of 0.71\ua0g/L/h and a yield on glucose of 0.23\ua0g/g. Conclusions: In this study, the yeast mitochondrion is reported as an attractive compartment for 3-HP production. The final 3-HP titer of 71.09\ua0g/L with a productivity of 0.71\ua0g/L/h was achieved in fed-batch fermentations, representing the highest titer reported for Saccharomyces cerevisiae so far, that demonstrated the potential of recruiting the yeast mitochondria for further development of cell factories

Exact Solution of a Yang-Baxter Spin-1/2 Chain Model and Quantum Entanglement

Entanglement is believed to be crucial in macroscopic physical systems for understanding the collective quantum phenomena such as quantum phase transitions. We start from and solve exactly a novel Yang-Baxter spin-1/2 chain model with inhomogeneous and anisotropic short-range interactions. For the ground state, we show the behavior of neighboring entanglement in the parameter space and find that the inhomogeneous coupling strengths affect entanglement in a distinctive way from the homogeneous case, but this would not affect the coincidence between entanglement and quantum criticality.Comment: 7 pages, 3 figure

Valence bond solid formalism for d-level one-way quantum computation

The d-level or qudit one-way quantum computer (d1WQC) is described using the valence bond solid formalism and the generalised Pauli group. This formalism provides a transparent means of deriving measurement patterns for the implementation of quantum gates in the computational model. We introduce a new universal set of qudit gates and use it to give a constructive proof of the universality of d1WQC. We characterise the set of gates that can be performed in one parallel time step in this model.Comment: 26 pages, 9 figures. Published in Journal of Physics A: Mathematical and Genera

Vortex Interactions and Thermally Induced Crossover from Type-I to Type-II Superconductivity

We have computed the effective interaction between vortices in the Ginzburg-Landau model from large-scale Monte-Carlo simulations, taking thermal fluctuations of matter fields and gauge fields fully into account close to the critical temperature. We find a change, in the form of a crossover, from attractive to repulsive effective vortex interactions in an intermediate range of Ginzburg-Landau parameters $\kappa \in [0.76-1]/\sqrt{2}$ upon increasing the temperature in the superconducting state. This corresponds to a thermally induced crossover from \typeI to \typeII superconductivity around a temperature $T_{\rm{Cr}}(\kappa)$, which we map out in the vicinity of the metal-to-superconductor transition. In order to see this crossover, it is essential to include amplitude fluctuations of the matter field, in addition to phase-fluctuations and gauge-field fluctuations. We present a simple physical picture of the crossover, and relate it to observations in \metal{Ta} and \metal{Nb} elemental superconductors which have low-temperature values of $\kappa$ in the relevant range.Comment: 9 pages, 6 figures. Accepted for publication in Physical Review

Liquid-Based Multijunction Molecular Solar Thermal Energy Collection Device

Photoswitchable molecules-based solar thermal energy storage system (MOST) can potentially be a route to store solar energy for future use. Herein, the use of a multijunction MOST device that combines various photoswitches with different onsets of absorption to push the efficiency limit on solar energy collection and storage is explored. With a parametric model calculation, it is shown that the efficiency limit of MOST concept can be improved from 13.0% to 18.2% with a double-junction system and to 20.5% with a triple-junction system containing ideal, red-shifted MOST candidates. As a proof-of-concept, the use of a three-layered MOST device is experimentally demonstrated. The device uses different photoswitches including a norbornadiene derivative, a dihydroazulene derivative, and an azobenzene derivative in liquid state with different MOSTproperties, to increase the energy capture and storage behavior. This conceptional device introduces a new way of thinking and designing optimal molecular candidates for MOST, as much improvement can be made by tailoring molecules to efficiently store solar energy at specific wavelengths