35 research outputs found
Reproducibility and intraindividual variation over days in buccal cell DNA methylation of two asthma genes, interferon γ (IFNγ) and inducible nitric oxide synthase (iNOS)
The biological mechanisms responsible for the onset and exacerbation of asthma symptoms in children may involve the epigenetic regulation of inflammatory genes after environmental exposures. Using buccal cells, we hypothesized that DNA methylation in promoter regions of two asthma genes, inducible nitric oxide synthase (iNOS) and interferon γ (IFNγ), can vary over several days. Repeat buccal samples were collected 4 to 7 days apart from 34 children participating in the Columbia Center for Children's Environmental Health (CCCEH) birth cohort study. Several field duplicates (sequential collection of two samples in the field) and replicates (one sample pyrosequenced twice) also were collected to ensure consistency with collection and laboratory procedures. DNA methylation was assessed by pyrosequencing a PCR of bisulfite-treated DNA. We found that replicate and field duplicate samples were correlated strongly (r = 0.86 to 0.99, P < 0.05), while repeat samples demonstrated low within-subject correlations (r = 0.19 to 0.56, P = 0.06 to 0.30). Our data reveal DNA methylation as a dynamic epigenetic mechanism that can be accessed safely and reproducibly in an inner city pediatric cohort using non-invasive buccal swabs and pyrosequencing technology
Effect of personal exposure to black carbon on changes in allergic asthma gene methylation measured 5 days later in urban children: importance of allergic sensitization
Background
Asthma gene DNA methylation may underlie the effects of air pollution on airway inflammation. However, the temporality and individual susceptibility to environmental epigenetic regulation of asthma has not been fully elucidated. Our objective was to determine the timeline of black carbon (BC) exposure, measured by personal sampling, on DNA methylation of allergic asthma genes 5 days later to capture usual weather variations and differences related to changes in behavior and activities. We also sought to determine how methylation may vary by seroatopy and cockroach sensitization and by elevated fractional exhaled nitric oxide (FeNO).
Methods
Personal BC levels were measured during two 24-h periods over a 6-day sampling period in 163 New York City children (age 9–14 years), repeated 6 months later. During home visits, buccal cells were collected as noninvasive surrogates for lower airway epithelial cells and FeNO measured as an indicator of airway inflammation. CpG promoter loci of allergic asthma genes (e.g., interleukin 4 (IL4), interferon gamma (IFNγ), inducible nitric oxide synthase (NOS2A)), arginase 2 (ARG2)) were pyrosequenced at the start and end of each sampling period.
Results
Higher levels of BC were associated with lower methylation of IL4 promoter CpG−48 5 days later. The magnitude of association between BC exposure and demethylation of IL4 CpG−48 and NOS2A CpG+5099 measured 5 days later appeared to be greater among seroatopic children, especially those sensitized to cockroach allergens (RR [95% CI] 0.55 [0.37–0.82] and 0.67 [0.45–0.98] for IL4 CpG−48 and NOS2A CpG+5099, respectively), compared to non-sensitized children (RR [95% CI] 0.87 [0.65–1.17] and 0.95 [0.69–1.33] for IL4 CpG−48 and NOS2A CpG+5099, respectively); however, the difference was not statistically different. In multivariable linear regression models, lower DNA methylation of IL4 CpG−48 and NOS2A CpG+5099 were associated with increased FeNO.
Conclusions
Our results suggest that exposure to BC may exert asthma proinflammatory gene demethylation 5 days later that in turn may link to airway inflammation. Our results further suggest that seroatopic children, especially those sensitized to cockroach allergens, may be more susceptible to the effect of acute BC exposure on epigenetic changes
Effect of personal exposure to black carbon on changes in allergic asthma gene methylation measured 5Â days later in urban children: importance of allergic sensitization
MAGIC and Fermi-LAT gamma-ray results on unassociated HAWC sources
The HAWC Collaboration released the 2HWC catalogue of TeV sources, in which 19 show no association with any known high-energy (HE; E greater than or similar to 10 GeV) or very-high-energy (VHE; E greater than or similar to 300 GeV) sources. This catalogue motivated follow-up studies by both the Major Atmospheric Gamma-ray Imaging Cherenkov (MAGIC) and Fermi-LAT (Large Area Telescope) observatories with the aim of investigating gamma-ray emission over a broad energy band. In this paper, we report the results from the first joint work between High Altitude Water Cherenkov (HAWC), MAGIC, and Fermi-LAT on three unassociated HAWC sources: 2HWC J2006+341, 2HWC J1907+084*, and 2HWC J1852+013*. Although no significant detection was found in the HE and VHE regimes, this investigation shows that a minimum 1 degrees extension (at 95 per cent confidence level) and harder spectrum in the GeV than the one extrapolated from HAWC results are required in the case of 2HWC J1852+013*, whilst a simply minimum extension of 0.16 degrees (at 95 per cent confidence level) can already explain the scenario proposed by HAWC for the remaining sources. Moreover, the hypothesis that these sources are pulsar wind nebulae is also investigated in detail
From inflammaging to healthy aging by dietary lifestyle choices: is epigenetics the key to personalized nutrition?
Selenium status in preschool children receiving a Brazil nut-enriched diet
© 2015 Elsevier Inc. Objective: The Brazilian Amazon region has selenium (Se)-rich soil, which is associated with higher Se levels in populations fed locally grown produce. Brazil nuts are a major source of dietary Se and are included with meals offered to children enrolled in public preschool in Macapá. The aim of this study was to examine Se intake and status of these children. Methods: The Macapá group consisted of 41 children from a public preschool who received 15 to 30 g of Brazil nuts 3 d/wk. The control group included 88 children from the nearby city of Belém who did not receive Brazil nut-enriched meals. In both groups, school meals comprised ≥90% of the children's total food consumption. Selenium was assessed using hydride generation quartz tube atomic absorption spectroscopy in plasma, erythrocytes, nails, hair and urine. Dietary intakes (macronutrients and Se) were evaluated using the duplicate-portion method. Results: Both groups received inadequate intakes of energy and macronutrients. Selenium intake was excessive in both groups (155.30 and 44.40 μg/d, in Macapá and Belém, respectively). Intake was potentially toxic in Macapá on days when Brazil nuts were added to meals. Although biomarkers of Se exposure exceeded reference levels in the Macapá group, no clinical symptoms of Se overload (selenosis) were observed. Conclusions: The inclusion of Brazil nuts in school meals provided to children with already high dietary Se intakes increased Se levels and may result in an increased risk for toxicity. As selenosis is associated with some chronic diseases, we recommend continued monitoring of Se intake and status in this population
CpG promoter methylation status is not a prognostic indicator of gene expression in beryllium challenge
Environmental Influences on the Epigenome: Exposure- Associated DNA Methylation in Human Populations
Calçado para pessoas com diabetes como forma de prevenção ao pé diabético
Este Trabalho de Conclusão de Curso (TCC) tenciona o desenvolvimento de um calçado para pessoas com diabetes, com foco no público feminino, como forma de prevenção aos pés diabéticos. O trabalho é divido em duas etapas, a primeira aborda o planejamento de projeto, a fundamentação teórica, o projeto informacional e o projeto conceitual, fundamentando o processo de desenvolvimento do produto para a realização da segunda etapa, que se conclui com a geração de um protótipo do produto proposto, um calçado que contribua para o não aparecimento de lesões nos pés. A segunda etapa abrange a criação do produto e suas etapas de desenvolvimento (criação de ideias, seleção e detalhamento da melhor alternativa). Inicialmente foi exposto o contexto no qual o produto será desenvolvido, definiu-se o público-alvo ao qual será destinado e fez-se um panorama dos conhecimentos necessários para o andamento do projeto, que culminou na elaboração de um conceito do produto, utilizado como foco na geração de alternativas. Posteriormente a ideia mais adequada foi selecionada, respeitando os requisitos elencados. A alternativa final combina tecnologias utilizadas em calçados de conforto e calçados de prevenção a lesões como o uso de palmilha que absorva impacto, forro com poucas costuras e capaz de absorver suor, flexibilidade do cabedal e forma maior, condizentes com as necessidades do público-alvo. O projeto foi validado através do prótipo avaliado pelo público-alvo, tanto em seu aspecto (estética) quanto no conforto propiciado.This Course Completion Work (TCC) intends to develop footwear for people with diabetes, focusing on the female audience, as a way to prevent diabetic foot. The work is divided in two stages. The first one deals with the project planning, the theoretical basis, the informational project and the conceptual project, basing the product development process for the second stage, which concludes with the generation of a prototype of the proposed product, a footwear that contributes to the non-appearance of foot injuries. The second stage covers the creation of the product and its stages of development (creation of ideas, selection and detailing of the best alternative). Initially, the context in which the product will be developed was defined, the target audience was defined and an overview of the necessary knowledge for the progress of the project, culminating in the elaboration of a concept of the product, used as focus on generating alternatives. Subsequently, the most appropriate idea was selected, respecting the requirements that were listed. The ultimate alternative combines technologies used in comfort footwear and injury-prevention footwear such as the use of impact-absorbing insole, a lining with few seams, and able to absorb sweat, flexibility of the material of the shoe and a bigger shape, consistent with the needs of the target audience. The project was validated through the prototype evaluated by the target public, based in their appearance (aesthetic) and in the comfort provided