Additional file 2 of BioCarian: search engine for exploratory searches in heterogeneous biological databases

Survey Detailed Results. (PDF 656 kb

TMH segment detection in protein 1OCC using the index .

<p>TMH segment detection in protein 1OCC using the index .</p

Performance comparison of various TMH predictors.

<p>Performance comparison of various TMH predictors.</p

TMH segment detection in protein 1OCC using the compositional index .

<p>TMH segment detection in protein 1OCC using the compositional index .</p

Snapshots of a hypothetical PPI network, showing its dynamics through different temporal, spatial and/or contextual settings.

<p>Nodes and edges of the same color belong to the same protein complex.</p

Statistical significance of scores differences between pairs of protein-complex detection methods without and with gene expression data based on the proposed framework.

<p>The displayed <i>p</i>-values are the ones less than or equal to 0.1 reflecting improvements in the scores, i.e. the matching qualities of the detected protein complexes.</p

The formula of the quality scored used to evaluate our approach.

<p>The formula of the quality scored used to evaluate our approach.</p

The N and C scores.

<p>The N and C scores.</p

Parameter settings of the applied biclustering algorithms.

<p>Parameter settings of the applied biclustering algorithms.</p

TMH segment detection in protein 1OCC using GA.

<p>TMH segment detection in protein 1OCC using GA.</p