Floristic analysis and biogeography of Tubiflorae in Egypt

The species distribution and biogeography of the Egyptian Tubiflorae were exam-ined in detail. We found 284 species of vascular plants belonging to 96 genera and 12 families, making the Egyptian Tubiflorae richer in species than that of other arid region floras: Libya and Saudi Arabia. The most species rich families were Scrophulariaceae, Boraginaceae, Labiatae, Convolvulaceae and Solanaceae, constituting more than 85% of the totál species in the order. The generic spectrum dominated by a suite of species-rich genera (Convolvulus, Heliotropium, Veronica, Solanum, Salvia, Cuscuta, Echium, Ipomoea and Orobanche). Therophytes were the most dominant life forms among the families, followed by chamaephytes and hemicryptophytes. Boraginaceae and Scrophulariaceae had the highest share of annuals. Remarkable distribution patterns of the life forms in the seven studied biogeographic zones were noticed. Trees were dominant in the Mediterranean zone, while shrubs, perennial herbs and therophytes were dominant in the Sinai. Altogether 8 endemic species and 14 near-endemics were included in the Tubiflorae of Egypt; mostly from Southern Sinai. We found that Labiatae and Scrophulariaceae were the families with higher concentration of endemics. Notably, Teucrium was among the genera of the Mediterranean Africa with highest endemism. Gamma diversity varied from 171 in the Sinai Peninsula to 43 and 39 in the Oases of the western Desert and along the Red Sea, respectively. Interestingly, highest significant values of similarity and species turnover (béta diversity) were observed between the Oases and the Nile lands. It is worthy noting the com-bined effect of both temperature and precipitation on gamma diversity of Tubiflorae in the 7 biogeographic zones. Our results indicated that almost one-half of the species showed a certain degree of consistency, i.e., with narrow geographic expansion. On the basis of UPGMA clustering and PCoA analysis, 4 floristic groups were recognized, each include one or more biogeographic zone. The occurrence of the species of Tubiflorae in the adjacent régiónál arid floras and their phytochorological afflnities, were discussed

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)

In 2008, we published the first set of guidelines for standardizing research in autophagy. Since then, this topic has received increasing attention, and many scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Thus, it is important to formulate on a regular basis updated guidelines for monitoring autophagy in different organisms. Despite numerous reviews, there continues to be confusion regarding acceptable methods to evaluate autophagy, especially in multicellular eukaryotes. Here, we present a set of guidelines for investigators to select and interpret methods to examine autophagy and related processes, and for reviewers to provide realistic and reasonable critiques of reports that are focused on these processes. These guidelines are not meant to be a dogmatic set of rules, because the appropriateness of any assay largely depends on the question being asked and the system being used. Moreover, no individual assay is perfect for every situation, calling for the use of multiple techniques to properly monitor autophagy in each experimental setting. Finally, several core components of the autophagy machinery have been implicated in distinct autophagic processes (canonical and noncanonical autophagy), implying that genetic approaches to block autophagy should rely on targeting two or more autophagy-related genes that ideally participate in distinct steps of the pathway. Along similar lines, because multiple proteins involved in autophagy also regulate other cellular pathways including apoptosis, not all of them can be used as a specific marker for bona fide autophagic responses. Here, we critically discuss current methods of assessing autophagy and the information they can, or cannot, provide. Our ultimate goal is to encourage intellectual and technical innovation in the field