A robust PCR for the differentiation of potential virulent strains of Haemophilus parasuis

Abstract Background Haemophilus parasuis is the etiological agent of Glässer’s disease in swine. H. parasuis comprises strains with heterogeneous virulence capacity, from non-virulent to highly virulent. Determination of the pathogenic potential of the strains is important for diagnosis and disease control. The virulence-associated trimeric autotransporters (vtaA) genes have been used to predict H. parasuis virulence by PCR amplification of their translocator domains. Here, we report a new and improved PCR designed to detect a different domain of the vtaA genes, the leader sequence (LS) as a diagnostic tool to predict virulence. Methods A collection of 360 H. parasuis strains was tested by PCR with LS specific primers. Results of the PCR were compared with the clinical origin of the strains and, for a subset of strains, with their phagocytosis and serum resistance using a Chi-square test. Results LS-PCR was specific to H. parasuis, and allowed the differential detection of the leader sequences found in clinical and non-clinical isolates. Significant correlation was observed between the results of the LS-PCR and the clinical origin (organ of isolation) of the strains, as well as with their phagocytosis and serum susceptibility, indicating that this PCR is a good predictor of the virulence of the strains. In addition, this new PCR showed a full correlation with the previously validated PCR based on the translocator domain. LS-PCR could be performed in a wide range of annealing temperatures without losing specificity. Conclusion This newly described PCR based on the leader sequence of the vtaA genes, LS-PCR, is a robust test for the prediction of the virulence potential of H. parasuis strains

Molecular interactions driving the layer-by-layer assembly of multilayers

This article presents an overview of the different types of intermolecular interactions behind the fabrication of multilayer assemblies using the layer-by-layer (LbL) assembly approach. It comments on the potential impact of each type of intermolecular interaction and materials assembled through them on the development of advanced functional systems or devices for several emerging applications. The discussion begins with a brief overview of the most commonly used bottom-up methods to modify surfaces and fabricate functional multilayer thin films, with a special focus on their main advantages and disadvantages.This work received funding from the European Union's Seventh Framework Programme (FP7/2007-2013) under grant agreement no. REGPOT-CT2012-316331-POLARIS. The work was also funded by FEDER through the Competitive Factors Operational Program (COMPETE) and by National funds through the Portuguese Foundation for Science and Technology (FCT) in the scope of the projects PTDC/FIS/115048/2009 and PTDC/CTM-BIO/1814/2012. The authors gratefully acknowledge Dr. Luca Gasperini (3B's Research Group, University of Minho, Portugal) for his help with the figures

The Unquantified Risk of Post-Fire Metal Concentration in Soil: a Review

Forest fire is a natural disturbance that occurs in many terrestrial ecosystems specifically in the semi-arid environments and is considered to be an important cause of environmental change. Though many causes of fire are identified, including lightning, volcanic eruption, power line sparks, etc., human involvement is the most significant factor. Fire events are able to alter the physical, chemical and biogeochemical properties of the soil and surface materials and are able to release major and trace metals into the environment. This may be more significant in mining-affected and industrial landscapes, where elevated concentrations of metals present in the soil. After the fire event, metals become more mobile due to the increase in soil surface exposure and the mobility associated with ash dispersal. This mobility may increase the bioavailability of the metals, which may generate water quality issues and may contribute to human and environmental health concerns. Even though, the influences of fire on many soil properties are well established, the behaviour of metals with respect to fire is not well investigated. However, a few studies report that major and trace metals include Cd, Cr, Co, Cu, Hg, Mn, Ni, Pb, Zn and As are mobilized after fire with increased concentrations in soil and water resources and this might pose a risk to human health and ecosystems. Climate change may increase the intensity, frequency and areal extend of fire events and hence increase the metal concentrations and their potential health impacts. This paper reviews post-fire (wild fire) mobility of metals in soil common in contaminated forest ecosystems. The human and ecological health risks of these metals are also considered. © 2017, Springer International Publishing Switzerland