Courtship and mating behaviour of the brilliant-thighed frog Allobates femoralis from Central Amazonia: Implications for the study of a species complex

The identification of divergence in reproductive traits may substantially improve integrative approaches to understand species limits within clades that are suspected to contain cryptic diversity. The frog Allobates femoralis has been regarded as a pan-Amazonian species, and widely used as a model for addressing evolutionary issues regarding patterns of intraspecific diversification, social organisation, and animal communication. Recent accumulation of genetic, morphological, and bioacoustic data gathered from different localities strongly supports the idea that it represents a species complex, but field behavioural observations related to courtship and mating are surprisingly scarce. Here, we provide a description of several aspects of the reproductive biology of A. femoralis from a Central Amazon site, and compare our results with the few published reports for the species. This study demonstrated that, besides the known divergence in the number of notes of the A. femoralis call, there are both quantitative and qualitative differences regarding reproductive traits between two populations of this taxon. The most striking difference was the observation of cephalic amplexus in the population from the Reserva Ducke, Brazil, which contrasts with the absence of any kind of body contact between A. femoralis pairs during mating interactions at the Panguana Biological Station, Peru. In addition, we report for the first time a set of visual components of the courtship behaviour, such as throat display, limb lifting, circling, and leg stretching. Behavioural differences can lead to a pre-zygotic isolation, thus representing a first step in the speciation process through differential sexual preferences. Hence, our finding of divergence in a set of traits probably related to mate recognition and choice is surprising within populations assigned to a single clade, and highlights the importance of considering behavioural traits in order to disentangle the evolutionary forces driving the diversification of A. femoralis. © 2011 Dipartimento di Biologia Evoluzionistica dell'Università, Firenze, Italia

FIGURE 2 in A new species of Allobates (Anura: Aromobatidae) from Paleovárzea Forest in Amazonas, Brazil

FIGURE 2. Dorsal (A) and ventral (B) views of holotype of Allobates paleovarzensis in life. Dorsal views of two other males (C and E) and a female (F) showing variation in the dorsal patterns. (D) Ventral views of female (left) and male (right) in life showing the yellowish throat in the female and the violet throat and chest in the male. (Photographs by A.P. Lima)Published as part of Lima, Albertina P., Caldwell, Janalee P, Biavati, Graziela & Montanarin, Anelise, 2010, A new species of Allobates (Anura: Aromobatidae) from Paleovárzea Forest in Amazonas, Brazil, pp. 1-17 in Zootaxa 2337 on page 5, DOI: 10.5281/zenodo.19322

Temporal patterns of reproductive activity and site attachment of the brilliant-thighed frog allobates femoralis from Central Amazonia

Field observations and mark-recapture sampling carried out in the Reserva Ducke in Central Amazonia provided information on the occurrence of reproductive events of the Brilliant-Thighed Frog, Allobates femoralis, in the context of seasonal rainfall. In addition, we report on the daily pattern of calling activity and the use of space by marked individuals. Rainfall was a strong determinant of the calling and breeding activities at a seasonal scale. The phenology of A. femoralis was affected by interannual differences in both the length and severity of the dry season. This species showed a consistent diel pattern throughout the year, with calling activity peaking between 1500 and 1600 h. At the seasonal scale, calling activity was higher during the wet months and was correlated positively with monthly rainfall. Although recruitment is concentrated in the late wet season, our observations of juveniles in the smallest size classes throughout the year indicated that reproduction occurs sporadically even during the dry season, probably stimulated by isolated episodes of rainfall. Territories varied greatly in size, ranging from 4.8 to 175.7 m2. Females did not establish or defend territories. Individuals of both sexes showed regional interseasonal attachment, and males maintained territories for up to 255 days. © 2012 Society for the Study of Amphibians and Reptiles

A new species of allobates (Anura: Aromobatidae) from paleovárzea forest in Amazonas, Brazil

Numerous species of aromobatid frogs in the genus Allobates from the Amazonian region of Brazil have been described in recent years. Herein, we describe a new Allobates from the state of Amazonas. This species is allopatric with three other species of Allobates, two of which we have described previously. The new species inhabits streams in small remnants of paleovárzea forest along margins of a small river, the Paraná do Castanho. Paleovárzeas are ancient floodplains of the Amazon River and its tributaries. Paleovárzea forests are transitional between terra firme forests, which are never flooded, and várzeas, which are seasonally flooded. Males and females of the new species are similar in size; males average 20.1 mm, females 19.8. Tadpoles have a distinct dark brown bar extending from the snout through the eye to midbody. The call of this species consists of quickly repeated groups of single notes and is unique compared to known species of Allobates. Courtship includes cephalic amplexus. Eggs are deposited on the forest floor in cup-shaped leaves in the litter. Unlike other species of Allobates, egg capsules in this species are opaque instead of clear. Copyright © 2010 Magnolia Press

Temporal Patterns of Reproductive Activity and Site Attachment of the Brilliant-Thighed Frog Allobates femoralis

Field observations and mark-recapture sampling carried out in the Reserva Ducke in Central Amazonia provided information on the occurrence of reproductive events of the Brilliant-Thighed Frog, Allobates femoralis, in the context of seasonal rainfall. In addition, we report on the daily pattern of calling activity and the use of space by marked individuals. Rainfall was a strong determinant of the calling and breeding activities at a seasonal scale. The phenology of A. femoralis was affected by interannual differences in both the length and severity of the dry season. This species showed a consistent diel pattern throughout the year, with calling activity peaking between 1500 and 1600 h. At the seasonal scale, calling activity was higher during the wet months and was correlated positively with monthly rainfall. Although recruitment is concentrated in the late wet season, our observations of juveniles in the smallest size classes throughout the year indicated that reproduction occurs sporadically even during the dry season, probably stimulated by isolated episodes of rainfall. Territories varied greatly in size, ranging from 4.8 to 175.7 m2. Females did not establish or defend territories. Individuals of both sexes showed regional interseasonal attachment, and males maintained territories for up to 255 days. © 2012 Society for the Study of Amphibians and Reptiles

Anthropogenic factors do not affect male or female jaguar habitat use in an Amazonian Sustainable Reserve

Conservation actions should account for species natural history and behavior related to differences between sexes. However, most studies have not taken into consideration non-independence of observations from the same individual. We used data from camera-trap surveys undertaken over six consecutive years to investigate habitat use by jaguar (Panthera onca) in varzea seasonally flooded forest. We used hierarchical modeling to assess sex differences in occurrence probability related to environmental factors, while accounting for individual and spatial autocorrelation. Specifically, we tested whether male and female jaguars responded differently to habitat type and anthropogenic influence. Our results do not support previous conclusions related to differences between sexes and indicate that, in the studied area, jaguars are habitat generalists, exploring all environments with similar probability during the low-water season. Human settlements also apparently have little effect on habitat use by jaguars in this area. The lack of avoidance of settlements might be due to the low levels of anthropogenic pressure in the area, which adds support to the effectiveness of sustainable-development reserves. The difference between our results and previous studies may be due to the fact that we took into account individual differences, or may be related to the unique environmental characteristics of the varzea of Mamirauá Sustainable Development Reserve in Central Amazonia

AMAZONIA CAMTRAP: a dataset of mammal, bird, and reptile species recorded with camera traps in the Amazon forest

The Amazon forest has the highest biodiversity on earth. However, information on Amazonian vertebrate diversity is still deficient and scattered across the published, peer-reviewed and grey literature and in unpublished raw data. Camera traps are an effective non-invasive method of surveying vertebrates, applicable to different scales of time and space. In this study, we organized and standardized camera trap records from different Amazon regions to compile the most extensive dataset of inventories of mammal, bird and reptile species ever assembled for the area. The complete dataset comprises 154,123 records of 317 species (185 birds, 119 mammals and 13 reptiles) gathered from surveys from the Amazonian portion of eight countries (Brazil, Bolivia, Colombia, Ecuador, French Guiana, Peru, Suriname and Venezuela). The most frequently recorded species per taxa were: mammals - Cuniculus paca (11,907 records); birds - Pauxi tuberosa (3,713 records); and reptiles - Tupinambis teguixin (716 records). The information detailed in this data paper opens-up opportunities for new ecological studies at different spatial and temporal scales, allowing for a more accurate evaluation of the effects of habitat loss, fragmentation, climate change and other human-mediated defaunation processes in one of the most important and threatened tropical environments in the world. The dataset is not copyright restricted; please cite this data-paper when using its data in publications and we also request that researchers and educators inform us of how they are using this data

NEOTROPICAL XENARTHRANS: a data set of occurrence of xenarthran species in the Neotropics

Xenarthrans—anteaters, sloths, and armadillos—have essential functions forecosystem maintenance, such as insect control and nutrient cycling, playing key roles as ecosys-tem engineers. Because of habitat loss and fragmentation, hunting pressure, and conflicts withdomestic dogs, these species have been threatened locally, regionally, or even across their fulldistribution ranges. The Neotropics harbor 21 species of armadillos, 10 anteaters, and 6 sloths.Our data set includes the families Chlamyphoridae (13), Dasypodidae (7), Myrmecophagidae(3), Bradypodidae (4), and Megalonychidae (2). We have no occurrence data onDasypus pilo-sus(Dasypodidae). Regarding Cyclopedidae, until recently, only one species was recognized,but new genetic studies have revealed that the group is represented by seven species. In thisdata paper, we compiled a total of 42,528 records of 31 species, represented by occurrence andquantitative data, totaling 24,847 unique georeferenced records. The geographic range is fromthe southern United States, Mexico, and Caribbean countries at the northern portion of theNeotropics, to the austral distribution in Argentina, Paraguay, Chile, and Uruguay. Regardinganteaters,Myrmecophaga tridactylahas the most records (n=5,941), andCyclopessp. havethe fewest (n=240). The armadillo species with the most data isDasypus novemcinctus(n=11,588), and the fewest data are recorded forCalyptophractus retusus(n=33). Withregard to sloth species,Bradypus variegatushas the most records (n=962), andBradypus pyg-maeushas the fewest (n=12). Our main objective with Neotropical Xenarthrans is to makeoccurrence and quantitative data available to facilitate more ecological research, particularly ifwe integrate the xenarthran data with other data sets of Neotropical Series that will become available very soon (i.e., Neotropical Carnivores, Neotropical Invasive Mammals, andNeotropical Hunters and Dogs). Therefore, studies on trophic cascades, hunting pressure,habitat loss, fragmentation effects, species invasion, and climate change effects will be possiblewith the Neotropical Xenarthrans data set. Please cite this data paper when using its data inpublications. We also request that researchers and teachers inform us of how they are usingthese data

Neotropical xenarthrans: a dataset of occurrence of xenarthran species in the Neotropics.

International audienceXenarthrans—anteaters, sloths, and armadillos—have essential functions forecosystem maintenance, such as insect control and nutrient cycling, playing key roles as ecosys-tem engineers. Because of habitat loss and fragmentation, hunting pressure, and conflicts withdomestic dogs, these species have been threatened locally, regionally, or even across their fulldistribution ranges. The Neotropics harbor 21 species of armadillos, 10 anteaters, and 6 sloths.Our data set includes the families Chlamyphoridae (13), Dasypodidae (7), Myrmecophagidae(3), Bradypodidae (4), and Megalonychidae (2). We have no occurrence data onDasypus pilo-sus(Dasypodidae). Regarding Cyclopedidae, until recently, only one species was recognized,but new genetic studies have revealed that the group is represented by seven species. In thisdata paper, we compiled a total of 42,528 records of 31 species, represented by occurrence andquantitative data, totaling 24,847 unique georeferenced records. The geographic range is fromthe southern United States, Mexico, and Caribbean countries at the northern portion of theNeotropics, to the austral distribution in Argentina, Paraguay, Chile, and Uruguay. Regardinganteaters,Myrmecophaga tridactylahas the most records (n=5,941), andCyclopessp. havethe fewest (n=240). The armadillo species with the most data isDasypus novemcinctus(n=11,588), and the fewest data are recorded forCalyptophractus retusus(n=33). Withregard to sloth species,Bradypus variegatushas the most records (n=962), andBradypus pyg-maeushas the fewest (n=12). Our main objective with Neotropical Xenarthrans is to makeoccurrence and quantitative data available to facilitate more ecological research, particularly ifwe integrate the xenarthran data with other data sets of Neotropical Series that will become available very soon (i.e., Neotropical Carnivores, Neotropical Invasive Mammals, andNeotropical Hunters and Dogs). Therefore, studies on trophic cascades, hunting pressure,habitat loss, fragmentation effects, species invasion, and climate change effects will be possiblewith the Neotropical Xenarthrans data set. Please cite this data paper when using its data inpublications. We also request that researchers and teachers inform us of how they are usingthese data