Most frequently matched genes in bovine.

<p>Most frequently matched genes in bovine.</p

Numbers of unique GeneIDs, GO Terms that are mapped by the ESTs with hits for the nine species analyzed.

<p>Numbers of GeneIDs, GO Terms, and GeneIDs that have a GO annotation are shown for the nine species analyzed, where applicable. For each camel sequence group (contig, singleton, and combination of the two), number of unique GeneIDs that are “hit” by BLAST analyses are shown. Where applicable, we also show number of GO terms mapped by the GeneIDs that got hit and number GeneIDs among this list that have a mapped GO term.</p

Most frequently matched genes in mouse.

<p>Most frequently matched genes in mouse.</p

Shared Genes:

<p>Comparison of genes found (and then matched in HomoloGene) in human, mouse, rat, and bovine. Regions not shown in the Venn diagram are genes shared by human and bovine only (403 genes) and mouse and rat only (536 genes).</p

Summary of EST analysis results.

<p>Summary of EST analysis results.</p

GO Categories:

<p>Top thirty Biological Process GO category terms found most abundant among the <i>Homo sapiens</i> genes similar to camel sequences.</p

Analysis Workflow:

<p>Outlay of analysis steps performed for Camel EST data. External programs used for analysis are shown where appropriate.</p

Sequence Length and ORF Length Distribution:

<p>Sequence length distribution for contigs and singletons (a), distribution of longest ORF lengths found in contigs and singletons (b), sequence length distribution for contigs and singletons with hits and no hits (c), and distribution of longest ORF lengths found in contigs and singletons with hits and no hits (d). Average ± standard dev. values of sequence and ORF lengths are overlaid on corresponding graphs. Sequence lengths up to 2,500 and ORF lengths up to 1,800 bp are shown for display purposes. 2.3% of contig and no singleton sequences have length longer than 2,500 bp (a), 2% of contig and no singleton sequences have an ORF longer than 1,800 bp (b), 1.8% of contigs with a hit and no other sequences in the remaining three groups have length longer than 2,500 bp (c), and 1.6% of contigs with a hit and no other sequences in the remaining three groups have an ORF longer than 1,800 bp (d).</p

Canonical Pathway:

<p>Most significantly associated pathway (NRF-2 mediated oxidative stress response pathway) by the data set of 8,405 genes found in camel ESTs shared by human, mouse, rat, and bovine using IPA. Molecules that exist in the data set are shown in red.</p

Most frequently matched genes in human.

<p>Most frequently matched genes in human.</p