287 research outputs found

    Patterning a Leaf by Establishing Polarities

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    Leaves are the major organ for photosynthesis in most land plants, and leaf structure is optimized for the maximum capture of sunlight and gas exchange. Three polarity axes, the adaxial–abaxial axis, the proximal-distal axis, and the medial-lateral axis are established during leaf development to give rise to a flattened lamina with a large area for photosynthesis and blades that are extended on petioles for maximum sunlight. Adaxial cells are elongated, tightly packed cells with many chloroplasts, and their fate is specified by HD-ZIP III and related factors. Abaxial cells are rounder and loosely packed cells and their fate is established and maintained by YABBY family and KANADI family proteins. The activities of adaxial and abaxial regulators are coordinated by ASYMMETRIC LEAVES2 and auxin. Establishment of the proximodistal axis involves the BTB/POZ domain proteins BLADE-ON-PETIOLE1 and 2, whereas homeobox genes PRESSED FLOWER and WUSCHEL-RELATED HOMEOBOX1 mediate leaf development along the mediolateral axis. This review summarizes recent advances in leaf polarity establishment with a focus on the regulatory networks involved

    Juvenile Leaves or Adult Leaves: Determinants for Vegetative Phase Change in Flowering Plants

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    Vegetative leaves in Arabidopsis are classified as either juvenile leaves or adult leaves based on their specific traits, such as leaf shape and the presence of abaxial trichomes. The timing of the juvenile-to-adult phase transition during vegetative development, called the vegetative phase change, is a critical decision for plants, as this transition is associated with crop yield, stress responses, and immune responses. Juvenile leaves are characterized by high levels of miR156/157, and adult leaves are characterized by high levels of miR156/157 targets, SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) transcription factors. The discovery of this miR156/157-SPL module provided a critical tool for elucidating the complex regulation of the juvenile-to-adult phase transition in plants. In this review, we discuss how the traits of juvenile leaves and adult leaves are determined by the miR156/157-SPL module and how different factors, including embryonic regulators, sugar, meristem regulators, hormones, and epigenetic proteins are involved in controlling the juvenile-to-adult phase transition, focusing on recent insights into vegetative phase change. We also highlight outstanding questions in the field that need further investigation. Understanding how vegetative phase change is regulated would provide a basis for manipulating agricultural traits under various conditions

    Post-Embryonic Phase Transitions Mediated by Polycomb Repressive Complexes in Plants

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    Correct timing of developmental phase transitions is critical for the survival and fitness of plants. Developmental phase transitions in plants are partially promoted by controlling relevant genes into active or repressive status. Polycomb Repressive Complex1 (PRC1) and PRC2, originally identified in Drosophila, are essential in initiating and/or maintaining genes in repressive status to mediate developmental phase transitions. Our review summarizes mechanisms in which the embryo-to-seedling transition, the juvenile-to-adult transition, and vegetative-to-reproductive transition in plants are mediated by PRC1 and PRC2, and suggests that PRC1 could act either before or after PRC2, or that they could function independently of each other. Details of the exact components of PRC1 and PRC2 in each developmental phase transitions and how they are recruited or removed will need to be addressed in the future

    PICKLE Associates with Histone Deacetylase 9 to Mediate Vegetative Phase Change in \u3cem\u3eArabidopsis\u3c/em\u3e

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    • The juvenile-to-adult vegetative phase change in flowering plants is mediated by a decrease in miR156 levels. Downregulation of MIR156A/MIR156C, the two major sources of miR156, is accompanied by a decrease in acetylation of histone 3 lysine 27 (H3K27ac) and an increase in trimethylation of H3K27 (H3K27me3) at MIR156A/MIR156C in Arabidopsis. • Here, we show that histone deacetylase 9 (HDA9) is recruited to MIR156A/MIR156C during the juvenile phase and associates with the CHD3 chromatin remodeler PICKLE (PKL) to erase H3K27ac at MIR156A/MIR156C. • H2Aub and H3K27me3 become enriched at MIR156A/MIR156C, and the recruitment of Polycomb Repressive Complex 2 (PRC2) to MIR156A/MIR156C is partially dependent on the activities of PKL and HDA9. • Our results suggest that PKL associates with histone deacetylases to erase H3K27ac and promote PRC1 and PRC2 activities to mediate vegetative phase change and maintain plants in the adult phase after the phase transition

    Characterization of Two Novel Toti-Like Viruses Co-infecting the Atlantic Blue Crab, Callinectes sapidus, in Its Northern Range of the United States

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    The advancement of high throughput sequencing has greatly facilitated the exploration of viruses that infect marine hosts. For example, a number of putative virus genomes belonging to the Totiviridae family have been described in crustacean hosts. However, there has been no characterization of the most newly discovered putative viruses beyond description of their genomes. In this study, two novel double-stranded RNA (dsRNA) virus genomes were discovered in the Atlantic blue crab (Callinectes sapidus) and further investigated. Sequencing of both virus genomes revealed that they each encode RNA dependent RNA polymerase proteins (RdRps) with similarities to toti-like viruses. The viruses were tentatively named Callinectes sapidus toti-like virus 1 (CsTLV1) and Callinectes sapidus toti-like virus 2 (CsTLV2). Both genomes have typical elements required for −1 ribosomal frameshifting, which may induce the expression of an encoded ORF1–ORF2 (gag-pol) fusion protein. Phylogenetic analyses of CsTLV1 and CsTLV2 RdRp amino acid sequences suggested that they are members of two new genera in the family Totiviridae. The CsTLV1 and CsTLV2 genomes were detected in muscle, gill, and hepatopancreas of blue crabs by real-time reverse transcription quantitative PCR (RT-qPCR). The presence of ~40 nm totivirus-like viral particles in all three tissues was verified by transmission electron microscopy, and pathology associated with CsTLV1 and CsTLV2 infections were observed by histology. PCR assays showed the prevalence and geographic range of these viruses, to be restricted to the northeast United States sites sampled. The two virus genomes co-occurred in almost all cases, with the CsTLV2 genome being found on its own in 8.5% cases, and the CsTLV1 genome not yet found on its own. To our knowledge, this is the first report of toti-like viruses in C. sapidus. The information reported here provides the knowledge and tools to investigate transmission and potential pathogenicity of these viruses

    Reduction of Electric Vehicle Electromagnetic Radiations Using a Global Network Model

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    To address an electric vehicle’s magnetic emission problem, a model-based improvement strategy is proposed to avoid resource-intensive experimental diagnosis processes, thus achieving higher efficiency. Considering the electrical and structural characteristics of electric vehicles, a network model is developed to predict magnetic emissions. It decomposes the electronic power system into a global network and external circuit nodes according to electrical size. The Z-parameter is used to characterize the global network for the decomposition of impedance coupling so that the model parameters can be obtained separately using different methods. With this network model, an evaluation index is designed to measure the influence of technical factors on magnetic emissions by comprehensively considering their contributions and rooms for improvement. Engineers can directly determine the main interference source according to this evaluation score, and select a proper filter to attenuate the interference

    Design and Implementation of WiMAX Baseband System

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    Pair-wise Layer Attention with Spatial Masking for Video Prediction

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    Video prediction yields future frames by employing the historical frames and has exhibited its great potential in many applications, e.g., meteorological prediction, and autonomous driving. Previous works often decode the ultimate high-level semantic features to future frames without texture details, which deteriorates the prediction quality. Motivated by this, we develop a Pair-wise Layer Attention (PLA) module to enhance the layer-wise semantic dependency of the feature maps derived from the U-shape structure in Translator, by coupling low-level visual cues and high-level features. Hence, the texture details of predicted frames are enriched. Moreover, most existing methods capture the spatiotemporal dynamics by Translator, but fail to sufficiently utilize the spatial features of Encoder. This inspires us to design a Spatial Masking (SM) module to mask partial encoding features during pretraining, which adds the visibility of remaining feature pixels by Decoder. To this end, we present a Pair-wise Layer Attention with Spatial Masking (PLA-SM) framework for video prediction to capture the spatiotemporal dynamics, which reflect the motion trend. Extensive experiments and rigorous ablation studies on five benchmarks demonstrate the advantages of the proposed approach. The code is available at GitHub

    Triple-View Knowledge Distillation for Semi-Supervised Semantic Segmentation

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    To alleviate the expensive human labeling, semi-supervised semantic segmentation employs a few labeled images and an abundant of unlabeled images to predict the pixel-level label map with the same size. Previous methods often adopt co-training using two convolutional networks with the same architecture but different initialization, which fails to capture the sufficiently diverse features. This motivates us to use tri-training and develop the triple-view encoder to utilize the encoders with different architectures to derive diverse features, and exploit the knowledge distillation skill to learn the complementary semantics among these encoders. Moreover, existing methods simply concatenate the features from both encoder and decoder, resulting in redundant features that require large memory cost. This inspires us to devise a dual-frequency decoder that selects those important features by projecting the features from the spatial domain to the frequency domain, where the dual-frequency channel attention mechanism is introduced to model the feature importance. Therefore, we propose a Triple-view Knowledge Distillation framework, termed TriKD, for semi-supervised semantic segmentation, including the triple-view encoder and the dual-frequency decoder. Extensive experiments were conducted on two benchmarks, \ie, Pascal VOC 2012 and Cityscapes, whose results verify the superiority of the proposed method with a good tradeoff between precision and inference speed
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