Zhao et al. Ranunculus Dataset.zip

Data for the paper Zhao et al., 'RNA-seq of Ranunculus sceleratus and identifying orthologous genes of four Ranunculus species'. Submitted to Frontiers in Plant Sciences.<br><br>File 'Unigenes of Ranunculus sceleratus.fa' includes all the unigenes assembled using program Trinity and TGICL.<br><br>Folder '1. Phylogenetic analyses' lists the ITS sequences and cpDNA sequences of four Ranunculus species, which was used for phylogenetic analyses.<br><br>Folder '2. All the orthologous clusters' lists sequences of the 3455 putative orthologous clusters identified using program OrthoMCL.<br><br>Folder '3. Orthologous clusters after filters' lists sequences of the 884 orthologous clusters after filtering the possible paralogous clusters.<br><br><br>Species name abbreviation:<br>Rbu = Ranunculus bungei<br>Rch = R. cantoniensis<br>Rsc = R. sceleratus <br>Rta = R. brotherusii <br><br>If you have any question, please contact Ling-Yun Chen ([email protected])