Annotation files for bins of Ca. Grellia alia genomes obtained in the study.

Files in .gbk (Genbank) format containing annotations (generated by prokka tool) for draft genomes of Ca. Grellia alia, obtained from sequencing single host cells (SC1-3) or bulk host culture.</p

Full assemblies derived from single cells (SC1-SC3) and bulk culture DNA of <i>Eutreptiella</i> CCMP3347.

Contains fasta files of assemblies generated in SPAdes from Illumina reads. </p

Phylogenetic tree and corresponding alignment of 16S rRNA genes of members of family Midichloriaceae.

Midichloriaceae_16S.contree - file for phylogenetic tree of Midichloriaceae 16S rRNA genes.Midichloriaceae_16S_alignment.fa - file with trimmed alignment used for calculation of Midichloriaceae 16S rRNA phylogenetic tree.</p

Genomic bins of Ca. Grellia alia retrieved from single-cell (SC1-3) and bulk culture assemblies.

Bins of Ca. Grellia alia obtained in the study. Bins were derived from single-cell assemblies of the host algae (SC1-3) and from bulk culture of the host. </p

Phylogenomic trees and corresponding trimmed and concatenated phylogenomic alignment of family Midichloriaceae (with Anaplasmataceae and Rickettsiaceae root) on 179 genes.

Midichloriaceae_phylogenomic_LG+C60+I+G4.contree - phylogenomic tree file calculated under LG+C60+I+G4 substitution model.Midichloriaceae_phylogenomic_LG+F+R5.contree - phylogenomic tree file calculated under LG+F+R5 substitution model.Midichloriaceae_concatenated_trimmed.fas - alignment based on dataset created by Gianotti et al. 2022 (DOI: 10.1128/aem.02432-21), supplemented orthologs from three additional genomes. For further details, see the publication.</p

Separate untrimmed ortholog alignments for phylogenomic tree of Midichloriaceae (with Anaplasmataceae and Rickettsiaceae root) (179 genes).

Separate untrimmed alignments of 179 orthologs for Midichloriaceae phylogenomic tree, based on dataset by Gianotti et al. 2022 (DOI: 10.1128/aem.02432-21).</p