Figure S3 from The Driver Mutational Landscape of Ovarian Squamous Cell Carcinomas Arising in Mature Cystic Teratoma

Phasing data for two tumors with bi-allelic TP53 mutations</p

Table S2 from The Driver Mutational Landscape of Ovarian Squamous Cell Carcinomas Arising in Mature Cystic Teratoma

A list of genes analysed for copy number state</p

Table S3 from The Driver Mutational Landscape of Ovarian Squamous Cell Carcinomas Arising in Mature Cystic Teratoma

Quality Control parameters on all sequenced samples</p

Supplementary methods and legends from The Driver Mutational Landscape of Ovarian Squamous Cell Carcinomas Arising in Mature Cystic Teratoma

Supplementary Methods and legends for Supplementary tables and figures</p

Figure S6 from The Driver Mutational Landscape of Ovarian Squamous Cell Carcinomas Arising in Mature Cystic Teratoma

Zygosity estimates for the three MCT samples that also had some degree of copy number alteration</p

Table S1 from The Driver Mutational Landscape of Ovarian Squamous Cell Carcinomas Arising in Mature Cystic Teratoma

A list of the 151 genes included in the Agilent Comprehensive Cancer Panel</p

Table S7 from The Driver Mutational Landscape of Ovarian Squamous Cell Carcinomas Arising in Mature Cystic Teratoma

Concordance of alterations in cases with multiple SCC samples</p

Figure S2 from The Driver Mutational Landscape of Ovarian Squamous Cell Carcinomas Arising in Mature Cystic Teratoma

Copy number profiles of three highly rearranged SCC genomes. Boxplots of copy number windows corresponding to MYC.</p

Table S4 from The Driver Mutational Landscape of Ovarian Squamous Cell Carcinomas Arising in Mature Cystic Teratoma

A full list of mutations identified in SCC and MCT samples</p

Table S8 from The Driver Mutational Landscape of Ovarian Squamous Cell Carcinomas Arising in Mature Cystic Teratoma

Raw copy number alterations for all genes in all samples</p