Modeling larval connectivity of coral reef organisms in the Kenya-Tanzania region

Most coral reef organisms have a bipartite life-cycle; they are site attached to reefs as adults but have pelagic larval stages that allow them to disperse to other reefs. Connectivity among coral reef patches is critical to the survival of local populations of reef organisms, and requires movement across gaps that are not suitable habitat for recruitment. Knowledge of population connectivity among individual reef habitats within a broader geographic region of coral reefs has been identified as key to developing efficient spatial management strategies to protect marine ecosystems. The study of larval connectivity of marine organisms is a complex multidisciplinary challenge that is difficult to address by direct observation alone. An approach that couples ocean circulation models with individual based models (IBMs) of larvae with different degrees of life-history complexity has been previously used to assess connectivity patterns in several coral reef regions (e.g., the Great Barrier Reef (GBR) and the Caribbean). We applied the IBM particle tracking approach to the Kenya-Tanzania region, which exhibits strong seasonality in the alongshore currents due to the influence of the monsoon. A 3-dimensional (3D) ocean circulation model with 2 km horizontal resolution was coupled to IBMs that track virtual larvae released from each of 661 reef habitats, associated with 15 distinct regions. Given that reefs provide homes to numerous species, each with distinctive, and in aggregate very diverse life-histories, several life-history scenarios were modeled to examine the variety of dispersal and connectivity patterns possible. We characterize virtual larvae of Acropora corals and Acanthurus surgeonfish, two coral reef inhabitants with greatly differing pelagic life-histories, to examine the effects of short (50 days) pelagic larval durations (PLD), differences in swimming abilities (implemented as reef perception distances), and active depth keeping in reef connectivity. Acropora virtual larvae were modeled as 3D passive particles with a precompetency period of 4 days, a total PLD of 12 days and a perception distance of 10 m. Acanthurus virtual larvae were characterized by 50 days precompetency period, a total PLD of 72 days and a perception distance of 4 km. Acanthurus virtual larvae were modeled in two ways — as 3D passive particles and including an idealized ontogenetic vertical migration behavior. A range of distances within which larvae were able to perceive reefs and directionally swim to settle on them during the competency period were evaluated. The influence of interannual environmental variations was assessed for two years (2000, 2005) of contrasting physics. The spatial scale of connectivity is much smaller for the short PLD coral, with successful connections restricted to a 1° radius (~100 km) around source reefs. In contrast, long distance connections from the southern to the northernmost reefs (~950 km) are common for virtual Acanthurids. Successful settlement for virtual Acropora larvae was 20% overall, with cross-region recruitment much increased compared to the coral larvae. Approximately 8% of Acropora larvae that successfully settled, recruited to their source reef (self-recruitment), an important proportion compared to only 1-2 % self-recruitment for Acanthurus. These rates and dispersal distances are similar to previous modelling studies of similar species in other coral reef regions and agree well with the few observational studies within the Kenya-Tanzania region

On the dynamics of the Zanzibar Channel

Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 120 (2015): 6091–6113, doi:10.1002/2015JC010879.The Zanzibar Channel lies between the mainland of Tanzania and Zanzibar Island in the tropical western Indian Ocean, is about 100 km long, 40 km wide, and 40 m deep, and is essential to local socioeconomic activities. This paper presents a model of the seasonal and tidal dynamics of the Zanzibar Channel based on the Regional Ocean Modeling System (ROMS) and a comparison of the model and observations. The seasonal dynamics of the channel is forced by remote processes and the local wind. Remote forcing creates the East African Coastal Current, a portion of which flows through the channel northward with a seasonally varying magnitude. The local wind enhances this seasonality in the surface Ekman layer, resulting in a stronger northward flow during the southwest monsoon season and a weak northward or occasionally southward flow during the northeast monsoon season. The tidal flows converge and diverge in the center of the channel and reduce the transport in the channel. The remotely forced, wind-forced, and tidal dynamics contain 5%, 3%, and 92% of the total kinetic energy, respectively. Despite their low kinetic energy, the remotely forced and wind-forced flows are most relevant in advecting channel water to the open ocean, which occurs in 19 days at the peak of the southwest monsoon season. The channel is well mixed, except during brief periods in the two rainy seasons, and temporarily cools between December and February. The dispersion of passive tracers is presented as an example of potential model applications.National Science Foundation Grant Numbers: OISE-0827059 , OCE-0550658 , OCE-0851493 , OCE-09274722016-03-1

Conversion of forest to agriculture increases colored dissolved organic matter in a subtropical catchment and adjacent coastal environment

Land-ocean dissolved organic matter (DOM) transport is a significant and changing term in global biogeochemical cycles which is increasing as a result of human perturbation, including land-use change. Knowledge of the behavior and fate of transported DOM is lacking, particularly in the tropics and subtropics where land-use change is occurring rapidly. We used Parallel Factor (PARAFAC) Analysis to investigate how land-use influenced the composition of the DOM pool along a subtropical land-use gradient (from near-pristine broadleaf forest to agri-urban settings) in Belize, Central America. Three humic-like and two protein-like components were identified, each of which was present across land uses and environments. Land-use mapping identified a strong (R2 = 0.81) negative correlation between broadleaf forest and agri-urban land. All PARAFAC components were positively associated with agri-urban land-use classes (cropland, grassland, and/or urban land), indicating that land-use change from forested to agri-urban exerts influence on the composition of the DOM pool. Humic-like DOM exhibited linear accumulation with distance downstream and behaved conservatively in the coastal zone whilst protein-like DOM exhibited nonlinear accumulation within the main river and nonconservative mixing in coastal waters, indicative of differences in reactivity. We used a hydrodynamic model to explore the potential of conservative humics to reach the region's environmentally and economically valuable coral reefs. We find that offshore corals experience short exposures (10 ± 11 days yr−1) to large (∼120%) terrigenous DOM increases, whilst nearshore corals experience prolonged exposure (113 ± 24 days yr−1) to relatively small (∼30%) terrigenous DOM increases

Priorities to inform research on marine plastic pollution in Southeast Asia

10.1016/j.scitotenv.2022.156704Sci Total Environ841156704

Corrigendum to “Priorities to inform research on marine plastic pollution in Southeast Asia” [Sci. Total Environ. volume 841 (2022) Article 156704]

10.1016/j.scitotenv.2022.159595SCIENCE OF THE TOTAL ENVIRONMENT857Pt